Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 235 6e-57
seq535 116 4e-21
>seq1903
Length=20131
Score = 235 bits (260), Expect = 6e-57
Identities = 969/1507 (64%), Gaps = 46/1507 (3%)
Strand=Plus/Plus
Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954
|||||||| | ||||| || || ||| | || | | |||||||| | ||||||||
Sbjct 4140 GTTGACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGG 4199
Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014
|| ||||| || || || |||| || || | ||| ||| || ||||| || || |
Sbjct 4200 CTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGAC 4259
Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA 106074
| | ||||| || | ||| | |||||||| | |||||||| ||||| || |
Sbjct 4260 GAGCAAGCTGTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCA 4319
Query 106075 GTTG--AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGA 106132
| || || || || | ||||||| || ||||| || | || | ||| | ||
Sbjct 4320 CAAGTCAGAA-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGT 4377
Query 106133 GAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGG 106192
|| |||| || | || |||| ||| | | | || | || | |||||||||
Sbjct 4378 GATCCCTTGAACGATTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAAGCCTCCAGG 4437
Query 106193 GATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCA 106252
| ||||| || || || |||||||| | |||| ||| || || || |||
Sbjct 4438 GCCGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCA 4497
Query 106253 AA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307
|| |||| || |||| | || | || || ||||| || ||||| | |||||
Sbjct 4498 AAGGGCATGCGCAG-GGCA----AGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAA 4552
Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367
|||||| ||| ||||| || || || || || || ||||| | || ||||
Sbjct 4553 TAGGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGACATCAA 4612
Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427
||| ||| || || | ||| | ||| |||| ||||||||| || | | | ||
Sbjct 4613 TGATCTTGTTAAGGTTGCGGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCGT 4672
Query 106428 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 106487
| || | | | ||| || || ||||| | || ||||| ||||| || |
Sbjct 4673 AGCAGCCTTCGTTGTAGTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACACGG 4732
Query 106488 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCG 106547
| |||||| | |||||| | || || || || | |||||| || || |
Sbjct 4733 CAACCTCATCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGG 4792
Query 106548 TCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 106607
| |||| ||||||||||| ||||| |||||| |||||||||||||||| ||||
Sbjct 4793 TTCCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGT 4852
Query 106608 TCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATG 106666
| || ||||| ||||| | | || || | | ||||| | || | | || |||
Sbjct 4853 TACCAGTCTCGGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGAGCGCGG----ATG 4908
Query 106667 GCGTTGG---CCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCC 106723
| ||| | ||||||||| ||||||||| || | ||| || |||||||| ||
Sbjct 4909 GTCTTGCGACCACGTCCCTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTCGCC- 4967
Query 106724 ACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTC 106782
| || ||| | || || || | || || || | || | ||| | ||| ||
Sbjct 4968 ATAGCAGTCAGCAAGGCCAGGACATTCGTTGGGGCACATGAGCGTCCAGT--CCAAGTTC 5025
Query 106783 --CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTACA 106839
|||||| ||||||||||| ||||| |||||||| || | | | || || || | |
Sbjct 5026 TTCTCAACACGCTTCATGAAGAGGTCGGGAATCCAGAGAGCAAGGAACAAG-TCGCGAGC 5084
Query 106840 CCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTG 106899
|| ||||||| | || ||||| || | ||||||||||| | || || |||||
Sbjct 5085 GCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTG 5144
Query 106900 CCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTAC 106953
||| ||||| || |||| || | || || ||||| ||| | |||| ||
Sbjct 5145 CCAGGGCTCGAGGTAGATGGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGAC 5201
Query 106954 ATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATT 107013
||| | || ||| ||| || || |||||||| ||||||||||| | || ||| ||
Sbjct 5202 ATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTT 5261
Query 107014 TGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCC 107073
|| || ||| ||| |||| | | |||| || || || ||||| ||
Sbjct 5262 GGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACC 5321
Query 107074 AGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTC 107133
|||| || || || ||||| | | || || |||||||||| | ||| ||
Sbjct 5322 AGCCATTTTGGAAATCATGGCACATGTCTTCAGGGTGTCATAGATACCCTCGATACTATC 5381
Query 107134 CTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTGA 107192
||||| || ||| | |||||| ||||| ||| || || || ||||| || ||||
Sbjct 5382 GTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTGA 5440
Query 107193 AGA-GGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCA 107249
| | |||| || | || || ||| | | |||| ||||| || |||||||||||
Sbjct 5441 ACAGGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCA 5498
Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309
|||| |||||||| || || |||||| | | ||| ||||||| ||||| || |
Sbjct 5499 GGACACGCTCAATGTCGTCTCCCCAGATGCCAACAGACACCCGCATAATCATGTGCTGTG 5558
Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGAC 107369
| || | | ||||||| ||| |||| || | ||| || || |||| |
Sbjct 5559 GCCGCTCAACAATCTTGCCATCAAGCTTCAGAAGGTATGACCGCTCCAGAGTCTTGAAGC 5618
Query 107370 CAAAGTA 107376
|||||||
Sbjct 5619 CAAAGTA 5625
>seq535
Length=62126
Score = 116 bits (128), Expect = 4e-21
Identities = 348/526 (66%), Gaps = 17/526 (3%)
Strand=Plus/Plus
Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332
|||||| || ||| ||||||||||| || || || || || || || ||| || ||
Sbjct 15093 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 15152
Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392
||||||||||| |||||||| | ||| | || | | || | ||| |||||||||
Sbjct 15153 AGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 15212
Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGTGTC--- 117449
||||| || ||||| |||| ||||||| ||| ||||| ||| || ||||
Sbjct 15213 GCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA---AGAGTTCTTGTCCTG 15269
Query 117450 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 117509
|| ||| || || ||||| | ||||| || ||| || || | || | ||||| |
Sbjct 15270 AATCCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 15329
Query 117510 AAATAACT-GCTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATAT 117567
|| | | ||| | | | | || ||||| ||||| |||| || | || ||
Sbjct 15330 GAAGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTGTCGATGAGCAGGGAGTAG 15387
Query 117568 GTTTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCT 117626
|| ||| || | | | ||| ||| | || | ||||||| | || || |||
Sbjct 15388 GTCTCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGG 15446
Query 117627 TATCTGCACTTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACC 117685
||||| || || |||| || | | | ||||| ||||| ||||| ||
Sbjct 15447 GATCTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGG 15505
Query 117686 CAGCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCT 117742
| |||||||| |||||||||| ||||| | ||| || | || |||| || | |
Sbjct 15506 CGGCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 15565
Query 117743 TCCAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 117788
||||||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 15566 TCCAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 15611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589963432440200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |