Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 223 4e-53
seq535 116 4e-21
>seq1903
Length=20131
Score = 223 bits (246), Expect = 4e-53
Identities = 1057/1654 (64%), Gaps = 54/1654 (3%)
Strand=Plus/Minus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205
|||||||| |||| || || ||| | || |||| ||| ||||||| | |
Sbjct 5625 TACTTTGGCTTCAAGACTCTGGAGCGGTCATACCTTCTGAAGCTTGATGGCAAGATTGTT 5566
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
|| |||||| ||||| | |||||||| | | |||||| || || ||||||||
Sbjct 5565 GAGCGGCCACAGCACATGATTATGCGGGTGTCTGTTGGCATCTGGGGAGACGACATTGAG 5506
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTC--CCAAGGTATGTTCATTCACG-CAACACCA 75322
|||| ||||||||||| || ||||| |||| | |||| || | | | |||
Sbjct 5505 CGTGTCCTGGAGACATACAACCTCATGTCTAGCAAG--TTCTTCACCCATGCCTCCCCCA 5448
Query 75323 ACCCTCTTCAATGCTGGTACACC-AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAA 75381
|||| ||||| || ||||| || || || ||| ||||| |||||| | ||| ||
Sbjct 5447 CCCCTGTTCAACGCCGGTACCCCGCAGGCC-CAGCTGTCCTCATGCTTCTTGGTCGACAT 5389
Query 75382 CAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAA 75441
||||| || ||| | |||||||||| || || | | ||||| || || ||
Sbjct 5388 GAAGGACGATAGTATCGAGGGTATCTATGACACCCTGAAGACATGTGCCATGATTTCCAA 5329
Query 75442 GTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCG 75501
|||||| ||||| || || || |||| | | |||| ||| |||
Sbjct 5328 AATGGCTGGTGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGC 5269
Query 75502 GGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGC 75561
|| || || ||| || | ||||||||||| |||||||| || || ||| ||| ||
Sbjct 5268 TGGCACCAACGGTACCTCCAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGC 5209
Query 75562 GCGCTATGTAAATCAAGCGGGGCGTCGCAAG------GGGTCCATCGCGGTCTACTTGGA 75615
| ||||| |||| ||| || |||| || | | || ||||| | ||
Sbjct 5208 CAGATATGTCGATCA---GGGTGGTAACAAGCGTCCTGGTGCTTTTGCCATCTACCTCGA 5152
Query 75616 ACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGA 75675
|| ||||| ||||| || | ||||||||||| | || ||||| || | |||||
Sbjct 5151 GCCCTGGCACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGA 5092
Query 75676 GGCTCGGTGTAGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGG 75734
|| || | | || || || | | | || |||||||| ||||| ||||||||||| |
Sbjct 5091 GGTCCGCGCTCGCGA-CTTGTTCCTTGCTCTCTGGATTCCCGACCTCTTCATGAAGCGTG 5033
Query 75735 TTGAG--GAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792
||||| || ||| | ||| | || | || || || | || || || | ||
Sbjct 5032 TTGAGAAGAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGTCCTGGCCTTGCTGA 4975
Query 75793 C-GCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGG---GTAGAG 75848
| || | || |||||||| || ||| | || ||||| || |||||| || |
Sbjct 4974 CTGCTAT-GGCGAGGAGTTCGAGGCCTTGTATGAGAAGTACGAGAAGGAGGGACGTGGTC 4916
Query 75849 CCAATGCGACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAG 75907
||| ||| | || | | || | | ||| | | || || || | ||||| |||
Sbjct 4915 GCAA---GACCAT-CCGCGCTCAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACCGAG 4860
Query 75908 ACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAAT 75967
||||| | || | ||||| ||||||||| || ||| ||||| |||||||||||
Sbjct 4859 ACTGGTAACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAAC 4800
Query 75968 TTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGAT 76027
||||||| ||| ||||| || || ||||| || || | |||||| | |||
Sbjct 4799 CTGGGAACCATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTGTGCCCCAGAT 4740
Query 76028 GAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACT 76087
||| || || ||||| ||||| || | ||||| || || ||| | | |
Sbjct 4739 GAGGTTGCCGTGTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTACGTCGACTACAACGAA 4680
Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147
|| | || | | | || ||||||||| |||| ||| | ||| | || || |||
Sbjct 4679 GGCTGCTACGACTTTAAGAAGCTTCATGAAGTCACCAAGGTCGTTGTCCGCAACCTTAAC 4620
Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACAC 76207
||||||| || | ||||| || || || || || || ||||| |||
Sbjct 4619 AAGATCATTGATGTCAACTACTATCCTGTCCAGGAGGCTCGCAACAGCAACATGCGCCAC 4560
Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCA 76267
||||||||||| | ||||| || ||||| || || | || | |||| || ||||
Sbjct 4559 CGACCTATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCT----TGCC-CTGCGCA 4505
Query 76268 -----TTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322
||||| || || || ||| |||| | |||||||| || || || |
Sbjct 4504 TGCCCTTTGAGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTTGAGACAATCTACC 4445
Query 76323 ACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382
|||| |||||||||| || | || | | | ||| |||| || | ||
Sbjct 4444 ACGCGGCCCTGGAGGCTTCCATGGAGATTGCCAAGGTGGAGGGTCCCTACGAATCGTTCA 4385
Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC 76442
|||| || || || ||| | || | || || || || ||||||| | || || || |
Sbjct 4384 AGGGATCACCTGCATCCGAGGGCATCCTCCAATTCGACATGTGGG-ATGTCAAGCC-TTC 4327
Query 76443 T--CAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500
| | | || ||||| |||||||| | ||||||||| | ||| | || |||||
Sbjct 4326 TGACTTGTGGGAGTGGGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTGTGCGCAACAG 4267
Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560
| | | || || ||||| || ||| ||| | || || |||| || || || ||
Sbjct 4266 CTTGCTCGTCGCCCCCATGCCCACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTG 4207
Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620
||| || || ||||| | |||||||||| | || | ||| || || ||||| |
Sbjct 4206 CTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAGGT 4147
Query 76621 TGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680
||||||| || |||| ||||| | | || ||||||||| | | |||||
Sbjct 4146 TGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTCTGGTCCGATGCCATGAA 4087
Query 76681 GGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATG 76736
| | | ||| || ||| | | || |||||||| || ||| | | ||||| || |
Sbjct 4086 GAACCGTATCATTGCTGAGAAC----GGCTCCATTCAGAACATCCCCAACATCCCCGAAG 4031
Query 76737 ATATCAAGAATCTCTACCGCACAGTGTGGGAAAT 76770
|||||||| | ||| || |||||||| ||
Sbjct 4030 ATATCAAGGCCTTGTACAAGACCGTGTGGGAGAT 3997
>seq535
Length=62126
Score = 116 bits (128), Expect = 4e-21
Identities = 348/526 (66%), Gaps = 17/526 (3%)
Strand=Plus/Minus
Query 64714 TGGACTGCGGAAGAAGTTGATTTGTCCAAAGATCTTGACGACTGGAAGACCC---TGAAT 64770
||||| || ||||| ||||| ||||||| ||||| |||||||||| | || ||||
Sbjct 15611 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 15552
Query 64771 GAAAATGAAAAGAAATTCATAAAGTACATCCTGGCATTCTTTGCTGGGTCCGATGGAATT 64830
|| | || ||| | ||||| |||||||||| |||||||| | || ||||| |||
Sbjct 15551 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 15492
Query 64831 GTTTTTGAGAATATCAATAA-CAATTTTGCGGATGAAGTGCAGATAAGCGAAGCGCGCTC 64889
|| ||||| | | | || |||| || || ||||| ||| || || |
Sbjct 15491 GTCAACGAGAACCTGGTCGAGCGCTTCAGCGGC-GAGGTCCAGATCCCCGAGGCTCGATG 15433
Query 64890 ATTCTACGCATATCAATGCCATAATGAA-ATGGTTCATGGCGAAACATATTCAAAATTGA 64948
||||||| | || | ||| ||| | | | || ||| || || || | |
Sbjct 15432 CTTCTACGGCT-TCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 15374
Query 64949 TTGACAAATACATTAAGGATGGATCTGAAAA-GAAGC-AGTTATTTGAAGCCATCCAAAC 65006
| |||| ||||| ||||| || | | | | ||| | | || | ||||| | ||
Sbjct 15373 TCGACACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 15316
Query 65007 TGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTT---GACACAAAGTC 65063
| || || ||| || ||||| | ||||| || || ||| || |||| || ||
Sbjct 15315 CATTCCTTGCATTCGCAAAAAGGCCGACTGGGCCATCAAGTGGATTCAGGACAAGAACTC 15256
Query 65064 TCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGG 65123
| ||||| ||| ||||||| |||| ||||| || ||||| ||||||||| |||
Sbjct 15255 T---TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGG 15199
Query 65124 GTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTC 65183
| || | | || | ||| | |||||||| ||||||||||| || || ||| ||
Sbjct 15198 TGCCTTTGCCTCCATCTTCTGGGTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTC 15139
Query 65184 AAATGAACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCC 65229
|| || || || || || ||||||||||| ||| || ||||||
Sbjct 15138 CAACGAGCTCATCTCTCGTGATGAGGGTCTGCACACTGACTTTGCC 15093
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596552038482400
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