Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_020864.1
Length=205622
Score E
Sequences producing significant alignments: (Bits) Value
seq2190 244 1e-59
seq1667 190 3e-43
seq1790 181 1e-40
seq780 138 1e-27
seq1046 105 9e-18
>seq2190
Length=78294
Score = 244 bits (270), Expect = 1e-59
Identities = 504/739 (68%), Gaps = 13/739 (2%)
Strand=Plus/Minus
Query 195305 GGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG-TGTAGA 195363
|||||||| | || ||||| ||||| || || ||| | | | | || || ||| ||
Sbjct 75537 GGTATCGACCTGGGTACTACGTACTCTTGCGTCGGTATCTTCCGTGAGGACCGATGT-GA 75479
Query 195364 GATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGATAA 195423
|| ||| | || ||||| || ||||| || || || |||| ||||||||| || || |
Sbjct 75478 TATCATCGCCAACGACCAGGGCAACCGAACGACCCCCTCGTTCGTTGCCTTCACCGACAC 75419
Query 195424 TGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAATACTGT 195483
|| ||||| |||| ||||| || || || ||| || |||||||| || || ||
Sbjct 75418 CGAGCGTCTGATTGGTGATGCGGCCAAGAACCAGGTCGCCATGAACCCCCAGAACACCGT 75359
Query 195484 CTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGACGATAT 195543
||| ||||| ||||| | || || ||||||||| | || | ||||| | || ||
Sbjct 75358 CTTCGACGCCAAGCGATTGATCGGACGCAAGTTTGCCGACTCCGAGGTCCAGGCTGACAT 75299
Query 195544 AAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAATGTTGA 195603
||| ||| | | | ||| | || | |||| ||||| | | | || ||
Sbjct 75298 GAAGCACTTCCCCT-TCAAGATTGTCGACAAG-GGCTCC-AAGCCCGTCGTCGAGGTCGA 75242
Query 195604 ATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTGATTAA 195663
|| | || |||||||| | || | ||||| || || || || ||| | ||| ||
Sbjct 75241 GTTCAAGGGCGAGAAGAAGAACTTCACCCCCGAGGAGATCTCCTCCATGATCCTGACCAA 75182
Query 195664 GATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACTGT 195723
|||| |||||||| || || | | | || | || || || | || || | |||||
Sbjct 75181 GATGCGTGAGACTGCCGAGTCCTACCTCGGAACCACCGTCAACAACGCCGTCATCACTGT 75122
Query 195724 ACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGG 195783
|| || ||||||| || || || ||||| || |||||||| | | ||||| ||
Sbjct 75121 CCCCGCCTACTTCAACGACAGCCAGCGTCAGGCCACCAAGGACGCCGGTCTCATTGCCGG 75062
Query 195784 TCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGA 195843
|| ||| || | || ||||| || || || || ||||| ||||| || || |||||
Sbjct 75061 CCTCAACGTCCTGCGTATCATCAACGAGCCCACCGCTGCTGCCATTGCCTACGGCCTGGA 75002
Query 195844 CAAGAACAAGGACGAAGATAAA---AATGTATTGATCTTTGATCTCGGTGGTGGTACGTT 195900
|||||| || ||| | | | || || | ||||| ||||||||||| ||||| ||
Sbjct 75001 CAAGAA---GGTCGAGGGTGAGCGCAACGTCCTCATCTTCGATCTCGGTGGCGGTACCTT 74945
Query 195901 TGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGA 195960
||||||||| || || | ||||| | || || ||||| || ||| | ||||| |||||
Sbjct 74944 TGATGTCTCTCTCCTGACCATTGAGGAGGGCATCTTCGAGGTCAAGTCCACTGCCGGTGA 74885
Query 195961 TACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCA-TTTGTCTGATGAGT 196019
||||| | ||||||||||||||||| |||||| || || ||||| | | || |
Sbjct 74884 CACTCACTTGGGTGGTGAAGATTTCGACAACCGTCTTGTCAACCACTTTGT-TAACGAAT 74826
Query 196020 TCCGTCGAAAGAATAAGAA 196038
|| || ||||| |||||
Sbjct 74825 TCAAGCGCAAGAACAAGAA 74807
>seq1667
Length=31153
Score = 190 bits (210), Expect = 3e-43
Identities = 179/228 (79%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||||||||| || || ||||| || || || || |||||||||||||| ||||||||
Sbjct 22486 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 22545
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
|| || ||||| ||| |||| | ||||| || || ||||| |||||||| || || |||
Sbjct 22546 GATACCATCGACAACGTCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 22605
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| || || ||||||||||| || || || || ||||| || || || | || ||||||
Sbjct 22606 CAGCGTCTGATTTTTGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 22665
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
| || ||||||||||| || ||||| ||||| | ||||| ||||||
Sbjct 22666 ATCCAGAAGGAGTCTACCCTCCACCTGGTTCTCCGCCTTCGTGGTGGT 22713
Score = 165 bits (182), Expect = 1e-35
Identities = 166/216 (77%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 171874 GTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGAT 171933
|| || ||||| || ||||| || |||||||||||||| ||||| || || || || ||
Sbjct 22797 GTCAAGACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCATCTGATACCATTGAC 22856
Query 171934 AACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATT 171993
||| |||| ||||||| || || ||||| || || || || || ||||| || | ||
Sbjct 22857 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCTGACCAGCAGCGCTTGATC 22916
Query 171994 TTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAG 172053
|| || || || |||||||| ||||| || |||||| | || |||||| |||| ||||||
Sbjct 22917 TTCGCCGGCAAGCAGCTTGAGGATGGCCGAACCCTCTCCGACTACAACATTCAGAAGGAG 22976
Query 172054 TCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
|| ||||| |||||||| || | || || ||||||
Sbjct 22977 TCCACTCTCCACCTTGTCCTTCGTCTCCGTGGTGGT 23012
Score = 158 bits (174), Expect = 2e-33
Identities = 174/232 (75%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| || || || || || || || || || || |||||||||||||| || |
Sbjct 23236 GTGGTATGCAGATTTTCGTCAAGACTCTCACAGGCAAGACAATCACCCTCGAGGTGGAAT 23295
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| || ||||| ||||| ||| |||| |||||||||| || ||||| |||||||| || |
Sbjct 23296 CTTCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTG 23355
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
| ||||| || | || ||||||||||| ||||| ||||| || || ||| | || |
Sbjct 23356 ACCAGCAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGAGCGACT 23415
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGG 172088
||||| | || |||||| || || ||| | || || | ||||| |||||
Sbjct 23416 ACAACATCCAGAAGGAGAGCACGCTGCACTTGGTGCTTCGTCTTCGTGGTGG 23467
Score = 154 bits (170), Expect = 2e-32
Identities = 174/233 (75%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916
|| ||||||| ||||| || || || | || || || || ||||| | ||||||||||
Sbjct 23008 GTGGTATGCAGATCTTCGTCAAGACGTTGACCGGCAAGACCATCACATTGGAGGTTGAGT 23067
Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976
| |||||||| ||||| || |||| | |||||||| || ||||| || || || || |
Sbjct 23068 CATCAGACACCATCGACAATGTCAAGTCAAAGATTCAGGACAAGGAGGGTATCCCCCCGG 23127
Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036
||||||| || || || ||||||||||| ||||| || || || || || | || |
Sbjct 23128 ATCAGCAGCGTCTCATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACTTTGAGCGACT 23187
Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089
||||| ||||||||||| || || |||||||| || | || || ||||||
Sbjct 23188 ACAACATTCAAAAGGAGAGCACACTTCACCTTGTCCTCCGTCTGCGTGGTGGT 23240
>seq1790
Length=95376
Score = 181 bits (200), Expect = 1e-40
Identities = 178/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921
||||| || || || || ||||| || || || || |||||||| ||||| ||||| ||
Sbjct 27894 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 27835
Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981
||||| ||||| || |||| ||||||| || || ||||| |||||||| || || |||
Sbjct 27834 GACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 27775
Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041
|| ||| | || || |||||||| ||||| || ||||| || |||||| | || ||||||
Sbjct 27774 CAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTACAAC 27715
Query 172042 GTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGTGC 172091
| || ||||||||||| || ||||| || || | || || ||||||||
Sbjct 27714 ATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGGTGC 27665
>seq780
Length=56788
Score = 138 bits (152), Expect = 1e-27
Identities = 471/724 (65%), Gaps = 19/724 (3%)
Strand=Plus/Plus
Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778
||||| || || ||||||| || || || ||||| || ||||| |||| ||| |||
Sbjct 52574 ACTGTCCCCGCCTACTTCAACGACAACCAGCGTCAGGCTACCAAGGATGCTGGTGCCATT 52633
Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838
|| || || ||| || | || ||||| || || || || || || || || || |||
Sbjct 52634 GCTGGCCTCAACGTCCTCCGTATCATCAACGAGCCTACCGCTGCCGCTATCGCCTACGGT 52693
Query 195839 CTGGA--CAAG-AACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895
|||| | | || | ||| | || || || |||||| ||||| |||||||||
Sbjct 52694 CTGGGTGCTGGTAAGACTGACAAGGAGCGCAACGTCCTGATCTACGATCTTGGTGGTGGT 52753
Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955
|| || |||||||| || ||||| || | |||||| | ||| || |||||||| |||
Sbjct 52754 ACTTTCGATGTCTCCCTGCTCAACATCCAGGGTGGTGTCTTCACCGTCAAGGCTACCGCT 52813
Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGTCTG-A 196014
||||| || || | ||||| | || || || | | | | | | | || | |
Sbjct 52814 GGTGACACCCACTTGGGTGGCCAGGACTTTGACAC-CAACCTGTTGGACCACTGCAAGAA 52872
Query 196015 TGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAA--ATCCTAGGGCTCTTCGTCGG 196072
|||||| || |||| ||||| | | | | || | || | ||||| || |
Sbjct 52873 GGAGTTCACCCGCAAGAGCAAGAAGG--ACCCCAGCAACGACCCCCGTGCTCTCCGAAGA 52930
Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACG--GCTCAAACAATGG 196130
|| | ||||| || || |||||||| || || ||||| | || || || | |
Sbjct 52931 CTCCGCACTGCTTGCGAGCGTGCCAAGCGTACCCTCTC--CAGCGGTGCCCAGGCCACCA 52988
Query 196131 TTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCACGTT 196190
|||||||||| || | || || || |||||| | || || |||||||| ||||
Sbjct 52989 TTGAGATTGACTCTCTCTTCGAGGGTGAGGACTTCACCATGACCATCACCCGTGCTCGTT 53048
Query 196191 TTGAAGAGTTAAACTC---TGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247
| || ||| | ||| | | || | | | | | | || ||||||| || || |
Sbjct 53049 TCGAGGAGCTCAACGCCAAGGCCTTCTCTGGCA---CTCTCGAGCCTGTTGCTCAGGTCC 53105
Query 196248 TTCGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAA 196307
| || || || || ||| || || || |||||||| || || || || |
Sbjct 53106 TCAAGGATGCCGCTATCGAGAAGAGCGCCGTCGAGGAGATTGTCCTGGTCGGTGGTTCTA 53165
Query 196308 CCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAACA 196367
||||||| || ||||| || || | || || |||||| | || | | | |
Sbjct 53166 CCCGTATCCCCAAGATCCAGAAGCTTCTGTCCGAGTTCTTCGACGGCAAGAAGCTCGAGA 53225
Query 196368 AAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCT 196427
| | |||||||| ||||| || ||||| || ||||| ||||| ||||| | ||| ||||
Sbjct 53226 AGAGCATCAACCCCGATGAGGCCGTTGCCTACGGTGCTGCCGTCCAGGCCGGTATCCTCT 53285
Query 196428 CAGG 196431
| ||
Sbjct 53286 CCGG 53289
>seq1046
Length=51196
Score = 105 bits (116), Expect = 9e-18
Identities = 171/242 (71%), Gaps = 3/242 (1%)
Strand=Plus/Plus
Query 195746 CAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGTCTTAGAATTATC 195805
||||| ||||| || |||||||| | | ||||| ||| | ||| || |||| ||
Sbjct 27634 CAACGTCAGGCCACCAAGGACGCCGGTATCATTGCCGGTTTGAACGTCCTCCGAATCGTC 27693
Query 195806 AATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAAA 195865
|| || || || || || || ||||| || ||||||||||||| | | | || || |
Sbjct 27694 AACGAGCCCACCGCCGCCGCTATTGCCTACGGTCTGGACAAGACCGATGGCG-AGCGCCA 27752
Query 195866 AATGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAA 195925
|| |||| ||| ||||| ||||||||||| |||||||| || || || || ||
Sbjct 27753 GAT-CATTG-TCTACGATCTTGGTGGTGGTACCTTTGATGTTTCTCTCCTGTCCATCGAC 27810
Query 195926 GGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTC 195985
||| | ||||| || |||||| || ||||| || || || |||||||| || ||
Sbjct 27811 AACGGTGTCTTCGAGGTCTTGGCTACCGCCGGTGACACCCACCTTGGTGGTGAGGACTTT 27870
Query 195986 GA 195987
||
Sbjct 27871 GA 27872
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 657843034175600
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