Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 188 6e-43
seq1790 100 3e-16
seq1667 87.8 2e-12
>seq1903
Length=20131
Score = 188 bits (208), Expect = 6e-43
Identities = 1055/1669 (63%), Gaps = 45/1669 (3%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCAATATTTTGA 138417
|||||||||||||||||||| | | |||| | || || | | || || |||
Sbjct 3997 ATCTCCCACACGGTCTTGTACAAGGCCTTGATATCTTCGGGGATGTTGGGGATGTTCTGA 4056
Query 138418 ATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT- 138476
||| ||||| | |||||||| || || ||||| ||||| | |||| | |
Sbjct 4057 ATGGAGCCGTTCTCAGCAATGATACGGTTCTTCATGGCATCG--GACCAGAGGCCGGTGT 4114
Query 138477 -GATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGAC 138535
|| || ||| || | || | ||| | ||||| || || ||||| | || || |
Sbjct 4115 CGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCGCCGGCAAGGACACGTC 4174
Query 138536 GAACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCG 138595
| ||| |||||| ||| | ||||| || | |||||||| ||||||||||| | |
Sbjct 4175 GCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGG 4234
Query 138596 TGGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTC 138655
| | || || |||||| || || | | || || | |||||| ||||||
Sbjct 4235 TACTGGCAGTGGGCATGGGGGCGACGAGCAAGCTGTTGCGCACACCGTGCTCCTTGATCT 4294
Query 138656 GTTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACT 138715
| ||||||||||| ||| |||||||| || ||| || | |||||| ||| | |
Sbjct 4295 GCTCCTTGAGCGAGTCCCACTCCCACAAGTCAGAAGGCTTGACATCCCACATGTCGAATT 4354
Query 138716 GTAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCG 138775
| | || ||| ||| || || | | |||| ||||| ||| | | | |
Sbjct 4355 GGAGGATGCCCTCGGATGCAGGTGATCCCTTGAACGATTCGTAGGGACCCTCCACCTTGG 4414
Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835
| | ||| || ||||| || || | | ||| || || || ||||||| || |
Sbjct 4415 CAATCTCCATGGAAGCCTCCAGGGCCGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCA 4474
Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCC 138895
|| || ||||||| ||| | |||||||| || ||| |||||||| || |
Sbjct 4475 GCTCGCGAGCCTCGGGAGACTCAAAGGGCATGCGCAGGGCAAGGAAAGCGTCGGCAAGAC 4534
Query 138896 CTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCG-GCTTC---G 138951
| || || || || || | ||| || ||||||| || ||| ||||| || || |
Sbjct 4535 CCTGGACACCAACACCAATAGGTCGGTGGCGCA----TGTTGCTGTTGCGAGCCTCCTGG 4590
Query 138952 ATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTA 139011
| |||||| ||||| ||||| ||||| ||||| | || || || || ||||| || |
Sbjct 4591 ACAGGATAGTAGTTGACATCAATGATCTTGTTAAGGTTGCGGACAACGACCTTGGT-GAC 4649
Query 139012 TGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATTT 139070
| | | || | | | ||| ||||| ||| |||||| ||||||| ||
Sbjct 4650 TTCATGAAGCTTCTTAAAGTCGTAGCAGCCTTCGTTGTAGTCGACG-------TAAGCAG 4702
Query 139071 GTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGAC 139130
| | |||| ||||| | ||||||||| || || || || ||| | | ||| ||||
Sbjct 4703 GGAGGGCCAAA--GAGGCCAAGTTGCACACGGCAACCTCATCTGGGGCACAGTACTCGAT 4760
Query 139131 AATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCG 139190
|| |||| || | || | ||| || || | || | ||| ||||| || ||
Sbjct 4761 GATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTTTGGTTGCTCTTGCG 4820
Query 139191 GTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAAT 139250
||| || ||| ||||| ||||| | || | ||||| || || | || | ||
Sbjct 4821 GTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTGGGCTTCCAGGAT 4880
Query 139251 GAATTTGAACAAGTCCCTAGCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCGT 139306
| | | ||| | | ||| | || ||| || || | || | || |||||
Sbjct 4881 GGAATACCACAGCTTCTGAGCGCGGATGGTCTTG-CG-AC--CACGTCCCTCCTTCTCGT 4936
Query 139307 ACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGT 139366
|||| || || | | ||||| || || ||| ||||| ||| | |||| | ||
Sbjct 4937 ACTTCTCATACAAGGCCTCGAACTCCTCGCCATAGCAGTCAGCAAGGCCAGGACATTCGT 4996
Query 139367 CAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAA 139426
|| |||||||||| ||| | |||| || || ||| ||||||| || || ||||
Sbjct 4997 TGGGGCACATGAGCGTCCAGTCCAAGTTCTTCTCAACACGCTTCATGAAGAGGTCGGGAA 5056
Query 139427 TCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC- 139485
|||| | ||| | | ||| ||||| || |||||| || ||| || |
Sbjct 5057 TCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCCGTGGTT--CTTGCG 5114
Query 139486 -ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC 139544
| | |||||| ||||| ||||| |||||||| || || || |||||||| | || ||
Sbjct 5115 GAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAAGCACC 5174
Query 139545 TTTCCGTTTG---CCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACAT 139601
|| ||| ||||| |||||||| | || ||| || ||||| || || | |||
Sbjct 5175 AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTTGAACACTCGAAGCAT 5234
Query 139602 CGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGAC 139661
|| | |||| | | || |||||||||| | ||| | | | || ||||
Sbjct 5235 GGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAGAGCCGGTGGCACGGAT 5294
Query 139662 GTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGT-A 139720
| || || || | |||||| || || | | |||||| || | | | || | | |
Sbjct 5295 GCGGTGGACGTTCAAGCCGATACCACCAGCCATTTTGGAAATCATGGCAC-ATGTCTTCA 5353
Query 139721 ATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAA 139780
|| || || ||||| || || ||||||| ||| ||||| |||||||| || |
Sbjct 5354 GGGTGTCATAGATACCCTCGATACTATCGTCCTTCATGTCGACCAAGAAGCATGAGGACA 5413
Query 139781 GTTGCGGTAGTTTCGTGCCGGCTGCAAACA-GAGTAGGACTCGCGTGCGTGAACATTTGT 139839
| || | | || ||||| |||| | || || || || ||||| | |
Sbjct 5414 GCTGGGCCTGCGGGGTACCGGCGTTGAACAGGGGTGGGGGAGGCATGGGTGAAGAACTTG 5473
Query 139840 TTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACA 139899
| ||||| | | ||| || || | | | | | |||| || ||| ||| || |||
Sbjct 5474 CTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACA 5533
Query 139900 GAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAG- 139958
|| || ||||| | ||| || || ||| || | | | ||| || | || ||
Sbjct 5534 GACACCCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGCCATCAAGCTTCAGAAGG 5593
Query 139959 -ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| |||| ||| || |||||| |||||||||| |||||||| ||
Sbjct 5594 TATGACCG--CTCCAGAGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTC 5640
>seq1790
Length=95376
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || || || || || || || || || || | |
Sbjct 27895 GATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 27836
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 27835 CGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCA 27776
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || |||||||| || || || |||||||||||| ||| | | || || || ||
Sbjct 27775 GCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTACAA 27716
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || || ||| |||| |||| |||| || ||
Sbjct 27715 CATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 27668
>seq1667
Length=31153
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || || || || ||||| || ||| | ||
Sbjct 23241 ATGCAGATTTTCGTCAAGACTCTCACAGGCAAGACAATCACCCTCGAGGTGGAATCTTCC 23300
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 23301 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 23360
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| || ||||||||||| || || |||||||| || | | | || || || |||
Sbjct 23361 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGAGCGACTACAAC 23420
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
|| || ||||| || || ||||||||| | || | || || |||
Sbjct 23421 ATCCAGAAGGAGAGCACGCTGCACTTGGTGCTTCGTCTTCGTGGTGGC 23468
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449884356139400
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