Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq1669 134 1e-26 >seq1669 Length=31036 Score = 134 bits (148), Expect = 1e-26 Identities = 200/284 (70%), Gaps = 0/284 (0%) Strand=Plus/Plus Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410 ||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| |||| Sbjct 5408 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 5467 Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470 |||| ||| | || |||| ||| |||| | || || || ||||||||| | || Sbjct 5468 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 5527 Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530 |||||||| | || | | || || |||| | || ||||| || || |||| Sbjct 5528 AAGTACTTGATGACATAGGAGCCGGGGCGGGCAAGAGACTGGGCGACGCTGGACAAGTTG 5587 Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590 |||| || |||||||| ||||| ||||| ||||| | ||||| || |||| ||| Sbjct 5588 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATC 5647 Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634 ||||||||||| || || || |||| ||| |||||| || Sbjct 5648 TTGTAGCGGTAAAAGGCATCGCTGACATCGCGACGAACGTTGAC 5691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412829750801015