Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq1669 134 1e-26
>seq1669
Length=31036
Score = 134 bits (148), Expect = 1e-26
Identities = 200/284 (70%), Gaps = 0/284 (0%)
Strand=Plus/Plus
Query 34351 ACAAACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCG 34410
||||||||| |||||| ||||| || ||||||| | ||| ||| ||||||| ||||
Sbjct 5408 ACAAACTTGTTGATGAAGCCATCGAGGTGGTCCTGCAGCTTTGCGGCATCGTGGGCGCCG 5467
Query 34411 TTGACGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCG 34470
|||| ||| | || |||| ||| |||| | || || || ||||||||| | ||
Sbjct 5468 TTGATGATCCAACGGTCGTCCTTGGGGTCGATGTTGGTCTGAGCTCCCAGCTCGAAACCA 5527
Query 34471 AAGTACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTG 34530
|||||||| | || | | || || |||| | || ||||| || || ||||
Sbjct 5528 AAGTACTTGATGACATAGGAGCCGGGGCGGGCAAGAGACTGGGCGACGCTGGACAAGTTG 5587
Query 34531 ACGATGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATT 34590
|||| || |||||||| ||||| ||||| ||||| | ||||| || |||| |||
Sbjct 5588 ACGACAACGGTCTTGATACCGTTACCCTTGCCTTCAATCTTGGTCTGGAGGCGCTCCATC 5647
Query 34591 TTGTAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCAC 34634
||||||||||| || || || |||| ||| |||||| ||
Sbjct 5648 TTGTAGCGGTAAAAGGCATCGCTGACATCGCGACGAACGTTGAC 5691
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412829750801015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |