Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_023177.1
Length=124688
Score E
Sequences producing significant alignments: (Bits) Value
seq1667 89.7 4e-13
seq1790 86.0 5e-12
>seq1667
Length=31153
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
|||||||| || ||||| || | || ||||| ||||| ||| |||| |||| | |
Sbjct 22486 ATGCAAATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTGGAGTCGTCC 22545
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
||||| ||| | | || || ||||| || || || ||| | || || |||
Sbjct 22546 GATACCATCGACAACGTCAAGTCTAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAG 22605
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | || |||| ||| || || || || ||||| | | ||| || | |||||||||
Sbjct 22606 CAGCGTCTGATTTTTGCTGGCAAGCAACTCGAGGATGGCCGAACTCTGTCCGACTACAAC 22665
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGT 107764
|| || ||||||||||| | ||| ||||
Sbjct 22666 ATCCAGAAGGAGTCTACCCTCCACCTGGT 22694
Score = 82.4 bits (90), Expect = 6e-11
Identities = 144/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615
||||| ||||| ||||| ||| | |||||||| || || ||| |||| ||| || |
Sbjct 23241 ATGCAGATTTTCGTCAAGACTCTCACAGGCAAGACAATCACCCTCGAGGTGGAATCTTCC 23300
Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675
|| || ||| | | || || |||||| || || || ||| | || || |||
Sbjct 23301 GACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 23360
Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735
||| | | || | ||| ||||| |||||||| |||| || || |||||||||
Sbjct 23361 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGCACCTTGAGCGACTACAAC 23420
Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTG 107765
|| || |||||| ||| ||||| |||||
Sbjct 23421 ATCCAGAAGGAGAGCACGCTGCACTTGGTG 23450
>seq1790
Length=95376
Score = 86.0 bits (94), Expect = 5e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612
|| ||||| ||||| ||||| || | || || || || || ||| | || |||| ||
Sbjct 27897 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 27838
Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672
||| || ||| | | || || ||||| || || || ||| | ||| |||
Sbjct 27837 TCCGACACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGAC 27778
Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732
|||||| || | || | || ||||| ||||||||||| | | ||| | | ||||||
Sbjct 27777 CAGCAGCGATTGATCTTCGCTGGTAAGCAGCTGGAGGATGGCCGAACCCTCTCCGACTAC 27718
Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782
||||| || ||||||||||| | ||| |||| || | |||| || ||
Sbjct 27717 AACATCCAGAAGGAGTCTACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 27668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 398865351612595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |