Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq2251 87.8 7e-12 >seq2251 Length=10920 Score = 87.8 bits (96), Expect = 7e-12 Identities = 119/163 (73%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| |||||||| || |||||||| |||||||||||| ||||| Sbjct 4654 CTCAATCAAGTGAGCGATTGTCATACGGGATGGAATGGCGTGAGGGTTGATGATGATGTC 4595 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 || | | || ||| | || ||||| || |||| |||| | | | ||||| Sbjct 4594 TGGAGTGACACCTTCTCTTG---TAAAGGGCATGTCCTCTTGTCGGTA-AGTAACACCAA 4539 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| ||||||||| |||| | || || |||||||| ||||| Sbjct 4538 TAGTGCCCTTTTGACCGTGACGAGAGGCGAACTTGTCTCCAAT 4496 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951915502222440