Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq1667 111 3e-19
>seq1667
Length=31153
Score = 111 bits (122), Expect = 3e-19
Identities = 120/159 (75%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 82652 ACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTC 82711
|||||| || || || || ||||||||||| || | || ||||| || || || || ||
Sbjct 23171 ACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGGATACCCTC 23112
Query 82712 CTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT 82771
||| || |||||||||| || ||||| || || || || | || || ||||| ||
Sbjct 23111 CTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCTGATGACTCAACCTCCAATGT 23052
Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
|| |||||||| ||||||||||| || || ||||||||
Sbjct 23051 GATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 23013
Score = 96.9 bits (106), Expect = 7e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654
||| || || |||||||| || || ||||| || || || || | | | |||
Sbjct 23456 ACGAAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACC 23397
Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714
|||||| || || || ||||||||||| | | || || || ||||| || || |||||
Sbjct 23396 GTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 23337
Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774
|| |||||||| | || || || || || || || || ||| || || | || ||
Sbjct 23336 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGAT 23277
Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
||||||||||| | ||||| || || ||||||||
Sbjct 23276 TGTCTTGCCTGTGAGAGTCTTGACGAAAATCTGCAT 23241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981797574898345
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |