Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1667 111 3e-19 >seq1667 Length=31153 Score = 111 bits (122), Expect = 3e-19 Identities = 120/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 82652 ACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTC 82711 |||||| || || || || ||||||||||| || | || ||||| || || || || || Sbjct 23171 ACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCCGGGGGGATACCCTC 23112 Query 82712 CTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGT 82771 ||| || |||||||||| || ||||| || || || || | || || ||||| || Sbjct 23111 CTTGTCCTGAATCTTTGACTTGACATTGTCGATGGTGTCTGATGACTCAACCTCCAATGT 23052 Query 82772 TATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || |||||||| ||||||||||| || || |||||||| Sbjct 23051 GATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCAT 23013 Score = 96.9 bits (106), Expect = 7e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || |||||||| || || ||||| || || || || | | | ||| Sbjct 23456 ACGAAGCACCAAGTGCAGCGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACC 23397 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| || || || ||||||||||| | | || || || ||||| || || ||||| Sbjct 23396 GTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTT 23337 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 || |||||||| | || || || || || || || || ||| || || | || || Sbjct 23336 GTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGAT 23277 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| | ||||| || || |||||||| Sbjct 23276 TGTCTTGCCTGTGAGAGTCTTGACGAAAATCTGCAT 23241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981797574898345