Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1667 105 4e-18
>seq1667
Length=31153
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||| | || ||| | || | || || |||||||| ||||| |||||||| |||
Sbjct 23240 ACCACCACGCAGACGGAGGACAAGGTGAAGTGTGCTCTCCTTTTGAATGTTGTAGTCGCT 23181
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||||| |||| || | || || || ||||| || | |||||||||||| | ||
Sbjct 23180 CAAAGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCCGGGGG 23121
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| || ||||| ||| || || | |||| ||| | |||||| ||| || |
Sbjct 23120 GATACCCTCCTTGTCCTGAATCTT-TGACTTGACATTGTCGATGGTGTCTGATGACTCAA 23062
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| || | ||||| || || || || ||||| || || ||||||||||||
Sbjct 23061 CCTCCAATGTGATGGTCTTGCCGGTCAACGTCTTGACGAAGATCTGCATA 23012
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328694565681600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |