Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08] 2,355 sequences; 38,137,656 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq1458 107 2e-18 >seq1458 Length=45513 Score = 107 bits (118), Expect = 2e-18 Identities = 161/226 (71%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCC-GCAGTCCACGTACCTGGCCCCAA 147289 ||||||||| ||||||| ||| |||||| | | ||| || |||||| ||| |||| Sbjct 40831 CAGCTGGTCGACGCCCTTGCCGGCGTAGTCGGCCTTTGCA-TCGACGTACTCGGCGCCAA 40773 Query 147290 AGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGC 147349 |||| | ||||||||||||||| || || |||||||||||| || | ||| | | || Sbjct 40772 AGTGTCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACCTCGCGGTGGGTCAGGC 40713 Query 147350 CCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGG 147409 | | | | ||| |||||| ||||||| | | |||||||||| || || | || Sbjct 40712 CGACGCTGTCGAGGAACTCGCGGGACCCATTGCCGTCCCAGATCTTGACGCCGACGTCGT 40653 Query 147410 AGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 ||| | ||| ||| |||| |||||||||||| ||||| Sbjct 40652 TGAGGGCGAGGGAGGATGTGTTGCCCTCGATGAACCAGAGGAGCTC 40607 Score = 102 bits (112), Expect = 1e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 146871 AATCTTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCAC 146930 ||||| |||| |||||| || || || | | ||||||| | | || | || | Sbjct 41248 AATCTCCAGCTCGGGGAATGGCCGCGGTTCGCGCTCCAGCTGGGTCTGGAGAGCGTCGAT 41189 Query 146931 GTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCC 146990 ||||| || ||||||||| ||||| |||| | ||| | | || ||| || | Sbjct 41188 GTGGTCGATGTAGACGTGTGCGTCTCCCATGACGTGGGTGAGGCTTCCGGGCACCAGATC 41129 Query 146991 GGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCC 147050 |||||| || | ||||| |||||||||| |||||||| ||||||||||||| || Sbjct 41128 ACACACGTGAGCGAGCATGTGCGTGAGCAGCGCATAGCTGGCAATGTTGAAGGGGATGCC 41069 Query 147051 CAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCA 147086 || |||||||| | || | |||||| |||||||| Sbjct 41068 AAGACCCATGTCGCAGGAGCGCTGGTATAGCTGGCA 41033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583470823572000