Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq535 122 3e-22
>seq535
Length=62126
Score = 122 bits (134), Expect = 3e-22
Identities = 359/540 (66%), Gaps = 19/540 (4%)
Strand=Plus/Minus
Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396
|| |||||| || ||||||||||| |||||||| || ||| |||||| | || ||
Sbjct 15614 TTCTGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTG 15555
Query 443397 TCTAGCCATGAACGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452
| | |||| || || | ||||| | |||| ||||||||||||| | ||
Sbjct 15554 ---AACGATGA-CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGA 15499
Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512
|| || ||| ||||| ||||| ||| ||| || ||| | | |||||||
Sbjct 15498 TGGCATTGTCAACGAGAACCTGGTCGAGCGCTTCAGCGGCGAGGTCCAGATCCCCGAGGC 15439
Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572
|| | |||||||| ||||| | ||||||||||| ||| ||||| |||| |
Sbjct 15438 TCGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACCTACTCCCT 15379
Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631
| | ||| | || ||| || || || || ||||| | | ||| || || ||
Sbjct 15378 GCTCATCGACAC-CTACATC--AAGGAGAACAGCCAGCGCAGCTACCTCTTCAACGC-CA 15323
Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAG 443688
| ||||| || |||| ||||| | |||||| | ||||| | | ||
Sbjct 15322 TTGAGACCATTCCTTGCATTCGCAAAAAGGCCGACTGGGCCATCAAGTGGATTCAG-GAC 15264
Query 443689 AAAATCTCAGC-TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTT 443747
|| | ||| | || | | |||| || || || ||||| | ||||| || | || ||
Sbjct 15263 AAGAACTCTTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTC 15204
Query 443748 AGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGAC 443807
||||| |||| ||||||||||||||| | || ||||| || || |||| ||||||||
Sbjct 15203 AGCGGTGCCTTT-GCCTCCATCTTCTGGGTCAAGAAGCGAGGTCTCATGCCTGGTCTGAC 15145
Query 443808 CTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|||| ||||| || ||| ||| || |||||| |||| ||||| ||||| || ||
Sbjct 15144 CTTTTCCAACGAGCTCATCTCTCGTGATGAGGGTCTGCACACTGACTTTGCCTGCCTGCT 15085
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588288074442975
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |