Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 262 5e-65
seq535 118 1e-21
>seq1903
Length=20131
Score = 262 bits (290), Expect = 5e-65
Identities = 1049/1628 (64%), Gaps = 54/1628 (3%)
Strand=Plus/Plus
Query 110551 CTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA-TGA 110609
||||||||| || ||||| | | ||| ||||| ||||| || | ||| || |||
Sbjct 4023 CTTGATATCTTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTC----TCAGCAATGA 4078
Query 110610 GA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCT 110666
| | |||||| | | ||||||||| || | | ||||| |||| ||
Sbjct 4079 TACGGTTCTTCATGGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGG 4138
Query 110667 TGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATG 110726
|||||||| ||||| || || ||| | || | |||||||||| | ||||| |
Sbjct 4139 GGTTGACAACCTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGG 4198
Query 110727 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 110786
| || ||||| || || || |||| || || | ||| ||| || ||||| || || |
Sbjct 4199 GCTCGAAGCACTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGA 4258
Query 110787 TCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGT 110846
| | ||||| || | ||| | ||||||||| | |||||||| ||||| ||
Sbjct 4259 CGAGCAAGCTGTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCC 4318
Query 110847 AGTTG--AGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGG 110904
| | || || || || | |||||||||| || || || | || | ||| || ||
Sbjct 4319 ACAAGTCAGAA-GGCTTGACAT-CCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGG 4376
Query 110905 AGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAG 110964
|| |||| || | ||| |||| ||| | | | || | || | ||||||||
Sbjct 4377 TGATCCCTTGAACGATTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAAGCCTCCAG 4436
Query 110965 GGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATC 111024
|| ||||| || || || |||||||| | |||| ||| || || || ||
Sbjct 4437 GGCCGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTC 4496
Query 111025 AAA-----TGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCA 111079
||| |||| || |||| | || | || || ||||| || ||||| | ||||
Sbjct 4497 AAAGGGCATGCGCAG-GGCA----AGGAAAGCGTCGGCAAGACCCTGGACACCAACACCA 4551
Query 111080 ATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCA 111139
||||||| ||| ||||| || || || || || || ||||| | || |||
Sbjct 4552 ATAGGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGACATCA 4611
Query 111140 ATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCA 111199
|||| ||| || || | ||| | ||| |||| ||||||||| || | | | ||
Sbjct 4612 ATGATCTTGTTAAGGTTGCGGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCG 4671
Query 111200 AAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACA 111259
| || | | | ||| || || ||||| | || ||||| ||||| ||
Sbjct 4672 TAGCAGCCTTCGTTGTAGTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACACG 4731
Query 111260 GCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATC 111319
|| |||||| | |||||| | || || || || | |||||| || ||
Sbjct 4732 GCAACCTCATCTGGGGCACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATG 4791
Query 111320 GTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGC 111379
|| |||| ||||||||||| ||||| |||||| |||||||||||||||| ||||
Sbjct 4792 GTTCCCAGGTTCTTTTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGG 4851
Query 111380 GTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCA-AACATCGGCGGCTGGTACAAT 111438
| || ||||| ||||| | || || || | | ||| | | || | | || ||
Sbjct 4852 TTACCAGTCTCGGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTGAGCGCGG----AT 4907
Query 111439 GGCGTTG---GCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 111495
|| ||| | ||||||||| ||||||||| || | ||| || |||||||| |
Sbjct 4908 GGTCTTGCGACCACGTCCCTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTC-GC 4966
Query 111496 CACCGC-GTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTT 111554
|| || ||| | || || || | || || || | || | ||| | ||| ||
Sbjct 4967 CATAGCAGTCAGCAAGGCCAGGACATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTT 5024
Query 111555 C--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAG-GGATGAAAAGAGATCTCTAC 111611
| |||||| ||||||||||| ||||| |||||||| || | | | || || || | |
Sbjct 5025 CTTCTCAACACGCTTCATGAAGAGGTCGGGAATCCAGAGAGCAAGGAACAAG-TCGCGAG 5083
Query 111612 ACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGT 111671
|| ||||||| | || ||||| || | ||||||||||| | || || ||||
Sbjct 5084 CGCGGACCTCTTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGT 5143
Query 111672 GCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTA 111725
|||| ||||| || |||| || | || || ||||| ||| | |||| |
Sbjct 5144 GCCAGGGCTCGAGGTAGATGGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGA 5200
Query 111726 CATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCAT 111785
|||| | || ||| ||| || || |||||||| ||||||||||| | || ||| |
Sbjct 5201 CATATCTGGCAGTGTTGTTGAACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGT 5260
Query 111786 TTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCC 111845
| || || ||| ||| |||| | | |||| || || || ||||| |
Sbjct 5261 TGGTGCCAGCAATGTAAGAGCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCAC 5320
Query 111846 CAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGT 111905
||||| || || || ||||| | | || || |||||||||| | ||| |
Sbjct 5321 CAGCCATTTTGGAAATCATGGCACATGTCTTCAGGGTGTCATAGATACCCTCGATACTAT 5380
Query 111906 CCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCATTG 111964
| ||||| || ||| | |||||| ||||| ||| || || || ||||| || |||
Sbjct 5381 CGTCCTTCATGTCGACCAAGAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTG 5439
Query 111965 AAGA-GGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCC 112021
|| | |||| || | || || ||| | | |||| ||||| || ||||||||||
Sbjct 5440 AACAGGGGTGGGGGAGGCATGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCC 5497
Query 112022 AAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGT 112081
| |||| |||||||| || || |||||| | | |||||||| | ||||| ||||
Sbjct 5498 AGGACACGCTCAATGTCGTCTCCCCAGATGCCAACAGACACCCGCATAATCATGTGCTGT 5557
Query 112082 GGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGA 112141
|| || | | ||||||| ||| |||| || | ||| || || ||||
Sbjct 5558 GGCCGCTCAACAATCTTGCCATCAAGCTTCAGAAGGTATGACCGCTCCAGAGTCTTGAAG 5617
Query 112142 CCAAAGTA 112149
||||||||
Sbjct 5618 CCAAAGTA 5625
>seq535
Length=62126
Score = 118 bits (130), Expect = 1e-21
Identities = 348/524 (66%), Gaps = 13/524 (2%)
Strand=Plus/Plus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| || ||| ||||||||||| || || || || || || || ||| |||||
Sbjct 15093 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 15152
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
||||||||||| |||||||| | ||| | || | | || | ||| |||||||||
Sbjct 15153 AGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 15212
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAA 122836
||||| || ||||| |||| ||||| | ||| ||||| ||| ||| | | ||
Sbjct 15213 GCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGA-AGAGTTCTTGTCCTGAA 15271
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAA 122896
||| || || ||||| | ||||| || ||| || || | || | ||||| | |
Sbjct 15272 TCCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGA 15331
Query 122897 ATAACT-GCTTC-TTTTCAGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGT 122954
| | | ||| | | | | || ||||| ||||| |||| || | || || ||
Sbjct 15332 AGAGGTAGCTGCGCTGGCTGTTC--TCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGT 15389
Query 122955 TTCGCCATGAACCAT-TTCATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTA 123013
||| || | | | ||| ||| | || | ||||||| | || || ||| |
Sbjct 15390 CTCGGAGTGGATGTTCTCCATCATGATCTGGA-AGCCGTAGAAGCATCGAGCCTCGGGGA 15448
Query 123014 TCTGAACCTCATCCGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCA 123072
|||| ||||| |||| || | | | ||||| ||||| ||||| || |
Sbjct 15449 TCTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCG 15507
Query 123073 GCAAAGAATGCCAGGATGTACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTC 123129
|||||||| |||||||||| ||||| | ||| || | || |||| || | |||
Sbjct 15508 GCAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTC 15567
Query 123130 CAGTCGTCAAGATCTTTGGACAAATCAACTTCTTCCGCAGTCCA 123173
||||||| ||||| ||||||| ||||| ||||| || |||||
Sbjct 15568 CAGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 15611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628013512308000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |