Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 235 7e-57
seq535 132 6e-26
>seq1903
Length=20131
Score = 235 bits (260), Expect = 7e-57
Identities = 1172/1849 (63%), Gaps = 42/1849 (2%)
Strand=Plus/Plus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTTGGCCTTTGATCGGAGGTAGTACATCCCCGTC 117857
|||| | |||| |||||||| || ||||| | || ||||||||||| || |||
Sbjct 3796 TCAACGGTGAATTGAATGGGAGCAGCTGCGGCCTGAGTGCGCAGGTAGTACATGCCGGTC 3855
Query 117858 TTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACTT 117917
||||| || |||||||| || | ||||| || | |||| | || ||
Sbjct 3856 TTGAGACCAAGCTTCCAGCCAGTGAAGTGCATGCTGGTAATCTTGCCCATTGTGGGGTCC 3915
Query 117918 TCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATA 117977
| |||| || ||||| ||||| || || ||||| || ||||| ||||||||
Sbjct 3916 TTCATGTGGATGTTCAGGGACTGGGACTGGTCAATGAAAGCACCACGATCAGCCGCCATC 3975
Query 117978 TCAATCACATCCTTCATCTTGA----TTTCCCACACAGTCCTGTAGAGGTTCTTAATATC 118033
| | || || || ||| | |||||||| ||| |||| | | ||| |||||
Sbjct 3976 TGGA-CA-AT--TTGGCGCTGAGAAATCTCCCACACGGTCTTGTACAAGGCCTTGATATC 4031
Query 118034 ATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCAT 118093
|| ||||| | ||| || || ||||| || | | | || | | ||||||
Sbjct 4032 TTCGGGGATGTTGGGGATGTTCTGAATGGAGCCGTTCTCAGCAATGATACGGTTCTTCAT 4091
Query 118094 ATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAAC 118150
| | |||||||| || | | || |||| |||| || ||||||||
Sbjct 4092 GGCATCGGACCAGAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAAC 4148
Query 118151 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCA 118210
||||| || || ||| |||| | | ||||| |||| ||||| ||||| |||||
Sbjct 4149 CTGGAACTCGCCGGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCA 4208
Query 118211 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 118270
||| ||||| |||| || |||| || ||| ||||||||||| || | ||| | |||
Sbjct 4209 CTCGTTGTTGCCCAGAATCTGGGAGGTACTGGCAGTGGGCATGGGGGCGACGAGCAAGCT 4268
Query 118271 GTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTAGTTGAGCTT 118330
||| || | ||| | ||| | || | |||||||| | |||||| || | |
Sbjct 4269 GTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGCGAGTCCCACTCCCACAAGTCAGA 4328
Query 118331 TGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAA 118390
| || | | |||||| || || |||||||| || | ||| || || ||||||| ||
Sbjct 4329 AGGCTTGACATCCCACATGTCGAATTGGAGGATGCCCTCGGATGCAGGTGATCCCTTGAA 4388
Query 118391 TGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGATA 118450
| || || || ||||| |||| || | || | ||||| ||||| ||||| ||
Sbjct 4389 CGATTCGTAGGGACCCTCCACCTTGGCAATCTCCATGGAAGCCTCCAGGGCCGCGTGGTA 4448
Query 118451 CATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTCG 118510
||||| ||||| || | |||| | |||||| || ||||| | | ||
Sbjct 4449 GATTGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCATGCG 4508
Query 118511 GCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTCAT 118570
|| || | || || ||||| |||||||| | ||||| || || || | |||
Sbjct 4509 CAGGGCAAGGAAAGCGTCGGCAAGACCCTGGACACCAACACCAATAGGTCGGTGGCGCAT 4568
Query 118571 ATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGATT 118630
|| || ||||| || || ||||| | || ||| || | | | || || ||
Sbjct 4569 GTTGCTGTTGCGAGCCTCCTGGACAGGATAGTAGTTGACATCAATGATCTTGTTAAGGTT 4628
Query 118631 TTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTC 118690
| || ||||| |||| |||||||||||| | | || | | || | |
Sbjct 4629 GCGGACAACGACCTTGGTGACTTCATGAAGCTTCTTAAAGTCGTAGCAGCCTTCGTTGTA 4688
Query 118691 ATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATC 118750
| ||| || ||| ||||| | || |||| || ||||| | |||||| |
Sbjct 4689 GTCGACGTAAGCAGGGAGGGCCAAAGAGGCCAAGTTGCACACGGCAACCTCATCTGGGGC 4748
Query 118751 AGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTG 118810
| |||||| || || || ||||| | ||| || || ||||| |||| |||||||||
Sbjct 4749 ACAGTACTCGATGATCTCGGTGCAGAGGTTGGAGCTGCGGATGGTTCCCAGGTTCTTTTG 4808
Query 118811 ATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTG 118870
|| ||| ||| || ||||||||| |||||| | || | || ||||| || ||
Sbjct 4809 GTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCAGTCTCGGTCTG 4868
Query 118871 GGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTG---GCTCGCC 118926
|| | || || | | ||| | | || | ||| | | ||| ||| | || |
Sbjct 4869 GGCTTCCAGGATGGAATACCACAGCTTCTG-AGCGCGGA---TGGTCTTGCGACCACGTC 4924
Query 118927 CCTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCC 118986
|||| | ||||||||| || | ||| || ||||| || || | || | || |
Sbjct 4925 CCTCCTTCTCGTACTTCTCATACAAGGCCTCGAACTCCTCGCCATAGCAGTCAGCAAGGC 4984
Query 118987 CTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACCCGCTTCAT 119044
| || | | ||||| | ||| | ||| | ||| || |||||| ||||||||
Sbjct 4985 CAGGACATTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAACACGCTTCAT 5042
Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104
||||||||| || |||||||| || ||| | || ||| ||| | ||||| | ||
Sbjct 5043 GAAGAGGTCGGGAATCCAGAGAGCAAGGAACAAGTCGCGAGCGCGGACCTCTTCCTTGCC 5102
Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164
|| || || | || | || || | || || |||||||| || || ||||| |
Sbjct 5103 GTGGTTCTTGCGGAGATCAAGGAACTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 5162
Query 119165 CGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218
|| | | || | |||| |||| |||| | ||||| || |||||| |||
Sbjct 5163 GGCAAAAGCACC---AGGACGCTTGTTACCACCCTGATCGACATATCTGGCAGTGTTGTT 5219
Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGA 119278
|| || |||||||| ||||| ||||| | ||| || || || || ||| |||
Sbjct 5220 GAACACTCGAAGCATGGGAATAATACCGTTGGAGGTACCGTTGGTGCCAGCAATGTAAGA 5279
Query 119279 CTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTG 119338
|||| | || ||||| || || || ||||| || ||| || || ||
Sbjct 5280 GCCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATACCACCAGCCATTTTGGAAATCAT 5339
Query 119339 CGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAG 119398
|| || | | || || | ||||| || ||||| || |||| | ||| |
Sbjct 5340 GGCACATGTCTTCAGGGTGTCATAGATACCCTCGATACTATCGTCCTTCATGTCGACCAA 5399
Query 119399 GAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGA-GAGTTGGTGTCGCG 119456
|||||| |||| || |||||| || ||||| |||||||| | | || || | ||
Sbjct 5400 GAAGCATGAGGACAGCTG-GGCCTGCGGGGTACCGGCGTTGAACAGGGGTGGGGGAGGCA 5458
Query 119457 TGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTT 119514
||| ||| | | |||| ||||| || ||| ||||||| ||| |||||| |
Sbjct 5459 TGGGTGA--AGAACTTGCTAGACATGAGGTTGTATGTCTCCAGGACACGCTCAATGTCGT 5516
Query 119515 CCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGGGTGTTTCCATCAGGATAC 119574
| || || || | || |||||||||| ||||| || || || | | | |
Sbjct 5517 CTCCCCAGATGCCAACAGACACCCGCATAATCATGTGCTGTGGCCGCTCAACAATCTTGC 5576
Query 119575 CATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGAGACCAAAATA 119623
|||| ||| || | ||||| | ||||| ||||||| ||||| ||
Sbjct 5577 CATCAAGCTTCAGAAGGTATGACCGCTCCAGAGTCTTGAAGCCAAAGTA 5625
>seq535
Length=62126
Score = 132 bits (146), Expect = 6e-26
Identities = 349/523 (67%), Gaps = 11/523 (2%)
Strand=Plus/Plus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| || ||| |||||||| ||||| |||||||| || || || ||| ||||||
Sbjct 15093 GGCAAAGTCAGTGTGCAGACCCTCATCACGAGAGATGAGCTCGTTGGAAAAGGTCAGACC 15152
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
||||||||||| |||||||| | |||||| || | ||| | || |||||||||
Sbjct 15153 AGGCATGAGACCTCGCTTCTTGACCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 15212
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA 130194
||||| || || || |||| || |||| |||||||| | ||| | ||
Sbjct 15213 GCCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAAGAGTTCTTGTCCTGAAT 15272
Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254
|||||| || ||||| | |||||||| || || || | ||||| || || | ||
Sbjct 15273 CCACTTGATGGCCCAGTCGGCCTTTTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAA 15332
Query 130255 GA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312
|| || || | | ||| | || |||||||| | || ||||| || || ||
Sbjct 15333 GAGGTAGCTGCGCTGGCTGTT--CTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGTC 15390
Query 130313 TCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371
||| |||| | | ||| || | ||| | ||||||| | || || ||| ||
Sbjct 15391 TCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGAT 15449
Query 130372 CTGTACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 130430
||| ||||| | || || | | | ||||| ||||| ||||| || | |
Sbjct 15450 CTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGG 15508
Query 130431 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 130487
|||| || |||||||| | ||||| | || || | ||||||| || | ||||
Sbjct 15509 CAAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 15568
Query 130488 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||| |||||||| || ||||| | ||| || || |||||
Sbjct 15569 AGTCGTGCAGATCCTTGGACAGATCAATCTCTTCGGCGGTCCA 15611
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618416994813800
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