Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq1903 257 2e-63
seq535 143 3e-29
seq1702 98.7 1e-15
>seq1903
Length=20131
Score = 257 bits (284), Expect = 2e-63
Identities = 940/1444 (65%), Gaps = 52/1444 (4%)
Strand=Plus/Minus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|||||| ||||| | ||||| ||| | | || || || || |||||||| ||||
Sbjct 5559 CCACAGCACATGATTATGCGGGTGTCTGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 5500
Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCC-TC 104338
||||||||||| || ||||| |||| | | ||| || || | || |||| |
Sbjct 5499 CTGGAGACATACAACCTCATGTCTAGCAAGTTCT--TCACCCATGCCTCCCCCACCCCTG 5442
Query 104339 TTCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAG 104398
||||| || ||||| || |||| ||||| |||||| | ||| || |||||
Sbjct 5441 TTCAACGCCGGTACCCCGCAGGCCCAGCTGTCCTCATGCTTCTTGGTCGACATGAAGGAC 5382
Query 104399 GACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCT 104458
|| ||| | |||||||||| || || | | ||||| || || || ||||
Sbjct 5381 GATAGTATCGAGGGTATCTATGACACCCTGAAGACATGTGCCATGATTTCCAAAATGGCT 5322
Query 104459 GGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACA 104518
|| ||||| || || || |||| | | |||| ||| ||| || ||
Sbjct 5321 GGTGGTATCGGCTTGAACGTCCACCGCATCCGTGCCACCGGCTCTTACATTGCTGGCACC 5262
Query 104519 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 104578
|| ||| || | ||||||||||| |||||||| || || ||| ||| || | |||
Sbjct 5261 AACGGTACCTCCAACGGTATTATTCCCATGCTTCGAGTGTTCAACAACACTGCCAGATAT 5202
Query 104579 GTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 104632
|| |||| | ||| ||||| || || | || |||| || ||||| |||
Sbjct 5201 GTCGATCAGGGTGGTAACAAGCGTCCT---GGTGCTTTTGCCATCTACCTCGAGCCCTGG 5145
Query 104633 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGG--CGC 104690
||||| || || | ||||||||||| | || ||||| || | || |||| |||
Sbjct 5144 CACGCCGACGTCTTTGAGTTCCTTGATCTCCGCAAGAACCACGGCAAGGAAGAGGTCCGC 5085
Query 104691 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 104750
| | ||||| | ||| |||||||||||||| || |||||||||||| | ||||||
Sbjct 5084 GCT--CGCGACTTGTTCCTTGCTCTCTGGATTCCCGACCTCTTCATGAAGCGTGTTGAGA 5027
Query 104751 AGA--GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCG 104807
||| ||| | ||| | ||| | || || || | ||||| || | || |||
Sbjct 5026 AGAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGTCCTGGCCTTGCTGACTGCTA 4969
Query 104808 TGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGC-- 104865
| || |||||||| || ||| | || ||||||||| | || || || | | | ||
Sbjct 4968 T-GGCGAGGAGTTCGAGGCCTTGTATGAGAAGTACGAGAAGGAGGGACGTG-GTC-GCAA 4912
Query 104866 GACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTA 104924
||| | | ||| | || | ||||| | | || || | | || |||||||||||||
Sbjct 4911 GACCATCCGCGCT-CAGAAGCTGTGGTATTCCATCCTGGAAGCCCAGACCGAGACTGGTA 4853
Query 104925 CACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTG 104984
|| | |||||| ||||| || ||| |||| ||||| || |||||||| ||||
Sbjct 4852 ACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAAAAGAACCTGGGAA 4793
Query 104985 TGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGG 105044
||| || ||||| ||||| || || ||| | || | | | ||||||| |
Sbjct 4792 CCATCCGCAGCTCCAACCTCTGCACCGAGATCATCGAGTACTGTGCCCCAGATGAGGTTG 4733
Query 105045 CTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC-- 105102
| ||||| ||| | || || | || ||||| || || || | | | || ||| |
Sbjct 4732 CCGTGTGCAACTTGGCCTCTTTGGCCCTCCCTGCTTACGTCGA-CTACA-ACGAAGGCTG 4675
Query 105103 ATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGT 105162
| || | | | || || || ||||| || || || | ||||| |||| |
Sbjct 4674 CTACGACTTTAAGAAGCTTCATGAAGTCACCAAGGTCGTTGTCCGCAACCTTAACAAGAT 4615
Query 105163 TATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCC 105222
|||||| || | || || || || ||||| || || ||| | ||||| ||
Sbjct 4614 CATTGATGTCAACTACTATCCTGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGACC 4555
Query 105223 AATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATT-CTTTGTCGCCACGCATTTG 105281
|||||| | ||||| |||||||| || || | ||| || | || ||| | ||||
Sbjct 4554 TATTGGTGTTGGTGTCCAGGGTCTTGCCGACGCTTTCCTTGCCCTG-CGCATGCCCTTTG 4496
Query 105282 ATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTC 105341
| || ||| || || | || || || |||||||| || || ||||| || |
Sbjct 4495 AGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTTGAGACAATCTACCACGCGGCCC 4436
Query 105342 TTGAGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
| ||||| | || ||| | || |||| || ||||| || ||| | || |||| ||
Sbjct 4435 TGGAGGC--TTCCATGGAGATTGCCAAGGTGGAGGGTCCCTACGAATCGTTCAAGGGATC 4378
Query 105400 TCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAG-CTTC--A 105456
|| || || | || | || ||||| || |||||||| | |||| |||| |
Sbjct 4377 ACCTGCATCCGAGGGCATCCTCCAATTCGACATGTGGGATG------TCAAGCCTTCTGA 4324
Query 105457 C---TACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCT 105513
| | || ||||| | |||||||| | ||||||||| | ||| | || ||||| |
Sbjct 4323 CTTGTGGGAGTGGGACTCGCTCAAGGAGCAGATCAAGGAGCACGGTGTGCGCAACAGCTT 4264
Query 105514 CCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTT 105573
||| | || || ||||| || ||| ||| | || || |||| || || || |||||
Sbjct 4263 GCTCGTCGCCCCCATGCCCACTGCCAGTACCTCCCAGATTCTGGGCAACAACGAGTGCTT 4204
Query 105574 TGAACCCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633
|| |||||||| | |||||||| | | || | ||| || || ||||| | ||||
Sbjct 4203 CGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCCGGCGAGTTCCAGGTTGT 4144
Query 105634 CAAC 105637
||||
Sbjct 4143 CAAC 4140
>seq535
Length=62126
Score = 143 bits (158), Expect = 3e-29
Identities = 353/523 (67%), Gaps = 13/523 (2%)
Strand=Plus/Minus
Query 94441 TGGACTGCTGAAGAGGTAGATCTCTCAAAGGATTTGGACGATTGGAAGACTC---TAAAT 94497
||||| || |||||| | ||||| || |||||| || |||| ||||| | | | ||
Sbjct 15611 TGGACCGCCGAAGAGATTGATCTGTCCAAGGATCTGCACGACTGGAACAACCGCCTGAAC 15552
Query 94498 GAAAATGAAAAGAAATTCATAAAATACATCCTGGCATTCTTTGCTGGATCCGATGGAATT 94557
|| | || ||| | ||||| |||||||||| |||||||| | || ||||| |||
Sbjct 15551 GATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTTGCCGCCTCTGATGGCATT 15492
Query 94558 GTTTTTGAGAATATCAATAACAACTTTGCTGATGAGGTGCA-ATCCTCTGAAGCGAGATC 94616
|| ||||| | | ||| | ||||| || |||| | || || |||
Sbjct 15491 GTCAACGAGAACCTGGTCGAGCGCTTCAGCGGCGAGGTCCAGATCCCC-GAGGCTCGATG 15433
Query 94617 CTTCTATGCGTATCAGTGTCATAATGAA-ATGGTGCATGGGGAGACATACAGTAAACTCA 94675
|||||| | | ||| |||| ||| | | | || ||||| ||| ||||
Sbjct 15432 CTTCTACGGCTTCCAGA-TCATGATGGAGAACATCCACTCCGAGACCTACTCCCTGCTCA 15374
Query 94676 TAGACAAGTATATTAAGGATGGTGCTGAGAA-GAAGC-AGCTCTTTGAAGCCATCCAAAC 94733
| |||| || || ||||| | | | | | ||| | ||||| | ||||| | ||
Sbjct 15373 TCGACACCTACATCAAGGA--GAACAGCCAGCGCAGCTACCTCTTCAACGCCATTGAGAC 15316
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAAAGTCGC 94792
|||| || |||| || || || || ||||| || |||||| || | |||| | |
Sbjct 15315 CATTCCTTGCATTCGCAAAAAGGCCGACTGGGCCATCAAGTGGATTCAGGACAAGAACTC 15256
Query 94793 GTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTT 94852
||||||||| |||| || | || ||||| || ||||| ||||||||| |||
Sbjct 15255 -TTCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGCATCTTCTTCAGCGGTG 15197
Query 94853 CCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCA 94912
|||| | | || | ||| |||||||||||||||||||||| ||||| ||| ||||
Sbjct 15196 CCTTTGCCTCCATCTTCTGGGTCAAGAAGCGAGGTCTCATGCCTGGTCTGACCTTTTCCA 15137
Query 94913 ACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||||||| ||||||||||| ||||| || ||| || |||||
Sbjct 15136 ACGAGCTCATCTCTCGTGATGAGGGTCTGCACACTGACTTTGC 15094
>seq1702
Length=100212
Score = 98.7 bits (108), Expect = 1e-15
Identities = 183/262 (70%), Gaps = 9/262 (3%)
Strand=Plus/Plus
Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762
||| || || || |||||||||| |||||| ||| ||| | ||| | | | || |
Sbjct 77827 GGCGTCGATTTCGTCAATGAAGATGATGCAAGGTGCATTCTTTCGACCCTCAGCGAACAA 77886
Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821
|| | ||||| | ||||| |||||||||||||||||||| | | || ||
Sbjct 77887 GTCTCTCACACGAGAAGGACCCACGCCAACAAACATCTCCACAAACTCGGATCCGCTCAC 77946
Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881
|| | ||| || || || || || ||| | || ||||||||||||||| || |
Sbjct 77947 GCTGAA-GAAAGGCACGCCGGACTCTCCAGCAGTAGCCTTGGCGAGAAGAGTCTTTCCTG 78005
Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9938
| ||||| || ||||| | ||||||||| ||||||||||| || |||| |||| |
Sbjct 78006 TTCCTGGTGGGCCGGCGAGAATGGCACCTCGAGGAATCTTGGCACCCAGCTTCTCAAACT 78065
Query 9939 ATCTCTCAGGTTGCTT-AAGAA 9959
|||| |||||||| |||||
Sbjct 78066 ---TCTCGGGTTGCTTCAAGAA 78084
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583243630260200
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