Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20pleuroti_20[genbank_20GCA_5F001721665.1_202016-09-08]
2,355 sequences; 38,137,656 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq1790 123 6e-23
seq1667 96.9 8e-15
>seq1790
Length=95376
Score = 123 bits (136), Expect = 6e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
||||| || || || |||||||| || ||||||||||| |||| | |||| |||||
Sbjct 27683 AGGACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 27742
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || || |||||||| | | ||||||||||| | || || ||||| ||
Sbjct 27743 TCCAGCTGCTTACCAGCGAAGATCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC 27802
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || |||||| | || | | |||| ||| ||| || ||||| || || ||
Sbjct 27803 TGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTC 27862
Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTACC 152110
|| |||||||| ||||| ||||| | |||||| || ||
Sbjct 27863 TTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTGCC 27900
>seq1667
Length=31153
Score = 96.9 bits (106), Expect = 8e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951
||| || || || || |||||||| || ||||||||||| |||| | ||||| |||||
Sbjct 22698 GAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGACAGAGTTCGGCCATC 22639
Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011
|| || || || || || || || | ||||||||| | | || || ||||| ||
Sbjct 22638 CTCGAGTTGCTTGCCAGCAAAAATCAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTC 22579
Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071
|| || || ||||| | || | | | || || ||| || || || || || ||
Sbjct 22578 CTGGATCTTAGACTTGACGTTGTCGATGGTATCGGACGACTCCACCTCGAGGGTGATGGT 22519
Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||| ||||| ||||| ||||||| |||||
Sbjct 22518 CTTGCCGGTGAGGGTCTTGACGAAGATTTGCAT 22486
Score = 95.1 bits (104), Expect = 3e-14
Identities = 142/202 (70%), Gaps = 0/202 (0%)
Strand=Plus/Minus
Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952
|||||||| || ||||| ||||| || || |||||||| |||| | |||| |||||
Sbjct 22996 AGGACAAGGTGGAGAGTGGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCATCC 22937
Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012
|| || || ||||||||||| | | ||||||||| | | ||| || ||||| ||
Sbjct 22936 TCAAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCC 22877
Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072
|| || || ||||| | || | | | || || ||| || || || || || ||
Sbjct 22876 TGGATCTTGGACTTGACGTTGTCAATGGTATCAGATGACTCCACCTCGAGGGTGATGGTC 22817
Query 152073 TTGCCCGTGAGAGTCTTCACGA 152094
|| || ||||| ||||| ||||
Sbjct 22816 TTTCCGGTGAGGGTCTTGACGA 22795
Score = 86.0 bits (94), Expect = 1e-11
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 151913 CTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCTTTTCCCGGCGAA 151972
||| || ||||||||||| ||| || || | || ||||| || || || || ||
Sbjct 23432 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTGCGACCGTCTTCCAGCTGCTTACCAGCAAA 23373
Query 151973 GATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTTTTGTTTGACAGT 152032
||| | | ||||||||| | | || || ||||| || ||||| || ||||| |
Sbjct 23372 GATCAAGCGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTT 23313
Query 152033 CTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGTGAGAGTCTTCAC 152092
|| | | |||| ||| || || || || || || || ||||| ||||||||||| ||
Sbjct 23312 GTCGATGGTGTCGGAAGATTCCACCTCGAGGGTGATTGTCTTGCCTGTGAGAGTCTTGAC 23253
Query 152093 GAAGACCTGCAT 152104
||| | ||||||
Sbjct 23252 GAAAATCTGCAT 23241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153785985260205
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |