Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq86 129 1e-24 >seq86 Length=1711676 Score = 129 bits (142), Expect = 1e-24 Identities = 322/477 (68%), Gaps = 14/477 (3%) Strand=Plus/Plus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||| ||||| |||| | ||| || || || || | ||| | || | Sbjct 1358206 TCCTTTGCCCAGCGCCTCGTTGCCTTTGCCGCTGTCGAGGGCAT-CT-TCTTCAGCGGTG 1358263 Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| ||||||| ||||| ||| |||| | ||||| ||||| | || | Sbjct 1358264 CCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCA 1358323 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| ||||||||||| || | || | | || || | || Sbjct 1358324 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTGCTGCACTCTC 1358383 Query 230348 AGCTCCAGAACAAGCTACCATTCGAGACGGTCAAAC---AAATCATTACAGAAGCAGTTG 230404 | || ||||| || ||| | || ||| | | | ||||| || || || || Sbjct 1358384 ACCTGAAGAACC-GCG-CCAG-CAAGGAGGTGATTCGTGACATCATCACCGACGCCGTCC 1358440 Query 230405 AAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCATGTCGCCTTATTGGCATGAACGC 230462 | ||| ||||||| |||| || ||| | || || ||| | ||||||||| | Sbjct 1358441 GCATCGAGCAGGAGTT--TTTGACCGAGGCTCTGCCTTGCGCCCTGCTGGGCATGAACTC 1358498 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 | || ||| |||||||| || || || ||||||||| | | ||||| || || | Sbjct 1358499 CAACCTCATGAAGCAGTACATTGAGTTTGTTGCCGACCGCCTGCTGGTTGCCCTCGGCAA 1358558 Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582 ||||| |||||||| || |||||||||| ||||||||| |||||| || || Sbjct 1358559 TGAGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTATGGAGAACATTTCCCTGGGCGG 1358618 Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 ||||||||||||||||| ||||| ||| ||||| |||| | | ||||| ||||| Sbjct 1358619 CAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGAAGGCCGGTGTCATGAA 1358675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057821736587210