Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13]
167 sequences; 32,472,817 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq140 268 1e-66
>seq140
Length=1272624
Score = 268 bits (296), Expect = 1e-66
Identities = 549/821 (67%), Gaps = 80/821 (10%)
Strand=Plus/Minus
Query 145516 TCCTTCCCCTCTCCCCCCAATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGG 145575
|||| || ||| | ||| ||||||| | ||| | |||||| || | | |||||||| |
Sbjct 1078545 TCCTCCCTCTCACAGCCCGATTAGACGGACATGTTCATGGGAATCGACTTGTGGGGGTCG 1078486
Query 145576 TAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG 145635
|| |||| | |||||||||| || | || |||| ||| | || ||| || |
Sbjct 1078485 TATCCCTTGACGACAAAGTCCTCGACCTTCCAGCCATCGATG-CTGCCGCCCTTTTCCCG 1078427
Query 145636 ----ATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCT 145690
||| ||| ||| || ||||| || ||| | || ||||| || ||||| ||
Sbjct 1078426 CGCAATCTCCAGCTCGGGGAACGGCCGCGG-CTCGCGCTCGAGCTGTGTCTGCAGGGCCT 1078368
Query 145691 CCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGA 145750
| | ||||| || ||||||||||||||| |||| ||||||| ||| | ||| ||| | |
Sbjct 1078367 CGATGTGGTCGATGTAGACGTGCGCGTCTCCCATGACGTGGGTGAGGCTCCCCGGCACCA 1078308
Query 145751 GGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCA 145810
| | | |||||||| ||||| || ||||| | |||||| || ||||||||||| |
Sbjct 1078307 GATCGCACACGTGGGCGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGA 1078248
Query 145811 CCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAG------------------- 145851
|| ||||||||||| | || |||||||| |||||||||
Sbjct 1078247 TGCCGAGCCCCATGTCGCAGGACCGCTGGTAGAGCTGGCAGTGGAGGTGACCCTTTGGCT 1078188
Query 145852 -----------GAGAGCTCC------------CCGC-----CCGCC----------ACGT 145873
||| ||||| |||| | ||| ||||
Sbjct 1078187 TGTTCTCCTCCGAGGGCTCCGGGGCGTCGACGCCGCGGCCGCGGCCCGGGTACGAGACGT 1078128
Query 145874 AGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCC 145933
|||||||| | | |||||||||||| |||||||| | | ||| ||||||||
Sbjct 1078127 AGAACTGGGCGAACATGTGGCAGGGCGGGAGGGCCATCTTGTTGAAGTCGCGCGGGTTCC 1078068
Query 145934 AGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCT------CTTGATCTCCCCTATCA 145987
| ||| |||| | | || |||| | ||||| | |||| | | |||
Sbjct 1078067 ACGCGCTGAGTATCATCCGCCTGTCATACGGGTTGGTGCGCAGCTTG---TGGACGATCT 1078011
Query 145988 GGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGG 146047
| || |||||||| ||||||| || ||| || || |||| ||| |||||| |||
Sbjct 1078010 CGGCC---AGCTGGTCGACGCCCTTGCCGGCGTAGTCGGTGTTGGCGTCGACGTACTCGG 1077954
Query 146048 CCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCC 146107
| || ||||||| ||||||||| ||||||||||| |||||||| ||| || | ||||
Sbjct 1077953 CGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCG 1077894
Query 146108 CCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC-- 146165
|||| ||| | | | ||||||| || ||||| |||||| |||||||||||||||||||
Sbjct 1077893 CCAGGCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGA 1077834
Query 146166 CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAG 146225
| |||| ||| | | ||||| ||| ||| |||||||||||| ||||| |||
Sbjct 1077833 CGTCGCTGAGGG--CCTTGGACGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGAC 1077776
Query 146226 GACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
||| | | |||||| | ||| ||||| || |||||||
Sbjct 1077775 GACGGCGCGGAGGAAGACGCGCTTCGTGGTGAGGAGGGGGA 1077735
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590075568214680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |