Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq143 93.3 9e-14 >seq143 Length=1198360 Score = 93.3 bits (102), Expect = 9e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 254201 CTGTCCGCCTTTCAAGCTCGTGATCCTGGACGAGGCGGACACCATGACGGCCGACGCGCA 254260 |||||| || |||||| || | ||||| |||||||| || ||||||| || || || Sbjct 298961 CTGTCCACCGTTCAAGATCATCATCCTCGACGAGGCCGATTCCATGACACAGGATGCCCA 299020 Query 254261 GTCCGCCCTCCGCCGAACGATGGAGACGCACTCCGTTGTGACGCGTTTTTGCCTGGTGTG 254320 | |||||| | || || ||||||||| || | | ||||| ||||| ||| | || Sbjct 299021 GAGCGCCCTGAGACGGACAATGGAGACGTACAGCAAAATCACGCGCTTTTGTCTGATCTG 299080 Query 254321 CAACTACGTGTCGAAGATCATCGCCCCGCTGGCTTCTCGGTGCGCCAAGTTTCGATTCA 254379 ||||||||| | | ||||||| ||| ||||| | | || |||||| || |||| Sbjct 299081 CAACTACGTCACCAGAATCATCGACCCCCTGGCCAGTAGATGTAGCAAGTTCCGCTTCA 299139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073764102475456