Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq135 82.4 5e-11 >seq135 Length=1177387 Score = 82.4 bits (90), Expect = 5e-11 Identities = 109/146 (75%), Gaps = 8/146 (5%) Strand=Plus/Minus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | || |||| |||||||||||||||||||| ||||||| | || || || Sbjct 452906 GTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTGATTCCCTCTCTG 452847 Query 71479 TCGAAGGGCATGTCCTCCTG--GGTCAG-GACAGCTCCGCATGTCCCCTTTTGCGCCGTG 71535 ||| |||||||||||||| ||| || |||| || || |||||||| ||||| Sbjct 452846 GTGAACGGCATGTCCTCCTGCCGGTAAGTGACA---CCAATAGTGCCCTTTTG-TCCGTG 452791 Query 71536 A-ATGACGCAAACTTGTCGCCCATCT 71560 | || ||||||||||| || |||| Sbjct 452790 ACGAGAAGCAAACTTGTCACCAATCT 452765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338764110507768