Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq123 113 7e-21 seq101 104 4e-18 >seq123 Length=145489 Score = 113 bits (124), Expect = 7e-21 Identities = 87/101 (86%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || |||||||| |||| ||| |||||| || |||||||| || ||||||||||| || || Sbjct 51375 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATCACCAAGCCCGCCAT 51433 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| |||||||||||||| ||||||||| |||||| Sbjct 51434 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 51474 Score = 87.8 bits (96), Expect = 3e-13 Identities = 119/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 16527 TCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTA 16586 |||||| | || |||| || |||| |||| ||| | ||| ||||||| || || | Sbjct 51536 TCTCTGCAGTGATCTACGAGGAGACCCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCA 51595 Query 16587 TCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATA 16646 ||| |||||| || || ||||||||||| || || ||||| ||||| || | || Sbjct 51596 TCCGTGATGCCGTCACATACACCGAGCACGCCAAGCGCAAGACCGTCACATCACTAGACG 51655 Query 16647 TCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692 | |||||||| ||||||| || ||||| | | || ||||| || Sbjct 51656 TTGTCTATGCCCTGAAACGACAGGGCCGCACCCTGTACGGTTTCGG 51701 >seq101 Length=1225426 Score = 104 bits (114), Expect = 4e-18 Identities = 85/101 (84%), Gaps = 2/101 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || || ||||| |||| ||| |||||| || |||||||| || || |||||||| ||||| Sbjct 965269 GCCAAACGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCTGCTAT 965211 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 ||| ||||| || ||||||||||| ||||||||| |||||| Sbjct 965210 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 965170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075047310731