Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq138 331 2e-85 >seq138 Length=1076999 Score = 331 bits (366), Expect = 2e-85 Identities = 1065/1632 (65%), Gaps = 38/1632 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTC-GTAATCCACAGATGTCTTC 363605 ||||| |||||| | || || | | ||||||||| || | | || || ||| |||| || Sbjct 836246 TTCACCCACGCCTCCCCTACCCTCTTCAATGCTGGTACCCCGCAAGCC-CAGCTGTCCTC 836304 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 ||||| | | | |||||||| || ||| |||||||||| |||||| || |||| Sbjct 836305 ATGCTTCTTGGTGGACATGAAGGATGACAGCATTGAGGGTATCTATGACACTCTGAAGAC 836364 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724 ||||| | || ||||||| || || || || ||| | | || ||||| | |||| Sbjct 836365 GTGTGCCATGATCTCCAAGATGGCTGGTGGTATCGGTTTGAACG-TCCACCGCATCCGTG 836423 Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | || | | ||||| |||||| || ||| || || | | |||||||| Sbjct 836424 CCACTGG-CTCCTACATCGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTG 836482 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || || || |||| ||||| | ||||||||||||||||| ||||| || || Sbjct 836483 CGAGTCTTCAACAACACTGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCC 836542 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 || || || || |||||||| || ||||| | ||||| || ||||| ||||| || Sbjct 836543 TTCGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAG 836602 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || || || ||||| ||| || ||| | | || Sbjct 836603 AACCACGGCAAGGAGGAGGTTCGCGCCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGAT 836662 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAA--GAATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | ||||| |||||| Sbjct 836663 CTCTTCATGAAGCGTGTCGAG--AAGAACTTGGACTGGACGCTCATGTGCCCCAACGAAT 836720 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || || ||| | || | || || || | || ||||| ||||||||||| || Sbjct 836721 GCCCTGGCCTTGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGA 836780 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 ||||||| | ||||||||| |||| || |||||||| |||| |||| |||| Sbjct 836781 GGGAGGGACGTGGTCGTAAGACCATTCGTGCTCAGAAGCTGTGGTACTCCATTCTGGAGG 836840 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | |||| ||||| || | |||| ||| | ||||| || |||||||||||| || Sbjct 836841 CCCAGACCGAGACCGGTAACCCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCA 836900 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATAC 364260 ||||| || || | || || | || |||| | ||||| || |||||||| ||||| ||| Sbjct 836901 ACCAGAAGAACTTGGGCACCA-TCCGCAGCTCTAACCTCTGCACCGAGATCATTGAGTAC 836959 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319 || ||||||||| ||||| || ||| | || || | || ||||| || ||||| Sbjct 836960 TGTGCCCCCGACGAGGTCGCCGTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTT 837019 Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 || || || | ||| | || | ||| | || || ||| | || | | Sbjct 837020 GACTACAACGAGGGCTGCTACGACTTCAAGAAGCTTCACGAAGTCACC-AAGGTGGTCGT 837078 Query 364375 -TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AG 364428 |||| ||| || | ||||| ||| | || || | | || || || || Sbjct 837079 CCGCAACCTCAACCGCATCATCGATGTGAACCACTACCCCGTCCAGGAGGCTCGCAACAG 837138 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 | || ||||| || || || || ||| | ||||| |||||||| ||||||| || Sbjct 837139 C-----AACATGCGCCACCGACCTATCGGTGTCGGTGTCCAGGGCCTTGCTGACGCGTTC 837193 Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548 | || || | ||||| || || || ||||| | || || ||| ||||||| Sbjct 837194 CTCGCTCTGCGTCTGCCCTTTGAGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTC 837253 Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAG 364608 || || || || |||||| | ||||| || | || || | |||| Sbjct 837254 GAGACCATTTACCATGCCGCCCTTGAAGCTTCCATGGAGATTGCCAAGGTCGAGGGCCCC 837313 Query 364609 TACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668 || | | |||| || ||| || |||| | |||||| || | ||| | Sbjct 837314 TATGAATCGTTCAAGGGATCGCCTGCATCTGAGGGTATCCTCCAGTACGACATGTGGGAC 837373 Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGG 364727 |||| ||| || | || ||| | ||||| | || | | | | | ||| |||| || Sbjct 837374 GTCAAGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGC-AGATCAAGGAGCACGG 837432 Query 364728 TACTCGCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGG 364787 | |||||| | | || || || |||||||| || ||| | |||||||| || Sbjct 837433 TGTCCGCAACAGCTTGCTTGTCGCTCCTATGCCCACTGCCAGTACCTCTCAGATCCTGGG 837492 Query 364788 AAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGG 364847 |||||||| |||||||| || | || ||| | || || || || ||| | || Sbjct 837493 CAACAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGG 837552 Query 364848 AGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGG 364907 || || | ||| || || | || ||||||| || |||| ||| |||||| Sbjct 837553 TGAGTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGGTC 837612 Query 364908 TGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATT 364967 ||| |||||||||| ||||| |||| || || || | ||||||||||| | Sbjct 837613 CGACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATTCCCAACAT 837672 Query 364968 TCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCAT 365027 || || || | ||| | | ||||| ||||| ||||| ||||| ||| || || Sbjct 837673 CCCCGAGGACATCAAGGCCCTGTACAAGACCGTCTGGGAGATTTCTCAGCG---TCAAAT 837729 Query 365028 TG---ATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084 || | |||||||| ||||| |||||||| ||| ||| |||||| | ||| | Sbjct 837730 TGTCCAGATGGCGGCTGATCGTGGTGCTTTCATCGACCAGTCCCAGTCCCTCAACATCCA 837789 Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 ||||| | || || | |||| |||| |||||| ||| ||| ||||| ||| Sbjct 837790 CATGAAGGACCCCACGATGGGCAAGATTACCAGCATGCACTTCACCGGCTGGAAGCTCGG 837849 Query 365145 TCTTAAGACAGG 365156 ||| ||||| || Sbjct 837850 TCTCAAGACCGG 837861 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303350811230594