Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq140 93.3 3e-14 >seq140 Length=1272624 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || ||| |||||| || |||||||||||| | Sbjct 72845 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 72904 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | | ||||| | || ||||| ||| | || || ||||| |||||| || Sbjct 72905 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 72964 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||| ||||| || | ||| || | | | | |||||| | |||| Sbjct 72965 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 73024 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || | |||||| || || || || || || ||||| ||||||||||| ||| Sbjct 73025 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCATCTTG 73075 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| ||| |||||| || |||||||||||| || || | |||| Sbjct 762803 AGGACCAAGTGCAGGGTGCTCTCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCGTCT 762862 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 |||| || || || || |||| || ||||| ||||| ||| | ||||| ||||| Sbjct 762863 TCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCTGGAGGAATACCCTCCTTGTCC 762922 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 ||| | ||| || | | | | ||| || | ||| |||| ||||||||| Sbjct 762923 TGAATCTTGGACTTGACGTTGTCGATAGTATCAGATGACTCGACCTCCAGGGTGATGGTC 762982 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || ||||| ||||||||||| Sbjct 762983 TTTCCTGTGAGGGTCTTGACGAAAATCTGCAT 763014 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || ||||||||||||| | |||| | | ||| Sbjct 763317 AGAACCAGGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCC 763376 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || || | || || ||||| ||||| || | |||||| ||||| Sbjct 763377 TCAAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCC 763436 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | |||||| | | | | |||||| | ||| || | ||||||||| Sbjct 763437 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 763496 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || ||||| || || ||||| || |||||||| Sbjct 763497 TTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 763528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || || |||||||| || ||||||||||||| | |||| | ||||||| | || Sbjct 763040 TGGAGTGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGC 763099 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || || ||||| |||||| ||| | |||||| ||||| || | Sbjct 763100 TTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTG 763159 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | | ||||| || ||| || | ||||| || || |||||| Sbjct 763160 GACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATCGTCTTGCCGGTC 763219 Query 16913 AGCGTTTTGAC 16923 || || ||||| Sbjct 763220 AGGGTCTTGAC 763230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087175519330