Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq147 140 2e-28 seq86 109 4e-19 >seq147 Length=1060137 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 60263 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 60204 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 60203 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 60169 >seq86 Length=1711676 Score = 109 bits (120), Expect = 4e-19 Identities = 200/293 (68%), Gaps = 0/293 (0%) Strand=Plus/Minus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGCGCCAAGGTCGAGGGTAAGGGAAAC 6254 || || ||||| |||||||| ||| |||||| ||||| | || || || || ||| Sbjct 1434095 GATGCCTTCTATCGCTACAAGATGGAACGCATCCAGACCAAGATTGAAGGCAAAGGCAAC 1434036 Query 6255 GGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTGCC 6314 || || || || || | |||||| |||| ||||| || | || | || |||| | Sbjct 1434035 GGCATCAAGACTGTTGTCGTCAACCTGCCCAGCGTCGCCCAGTCTCTTGCCCGTCCTGGC 1433976 Query 6315 ACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACAAA 6374 |||| | || || || || | ||| || || |||||||| | |||| | ||| Sbjct 1433975 TCCTATGTCATCAAGTACTTTGGTTTCGAGCTCGGTGCTCAGACCAACATTGACCCCAAG 1433916 Query 6375 AACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTGAC 6434 |||| || | ||| | ||||| | || | | ||||||||||||||| || || Sbjct 1433915 GACGACCGTTGGATCATCAACGGCGCCCACGATGCCGCCAAGCTGCAGGACCATCTCGAT 1433856 Query 6435 GGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||| || |||||||||||| || | | ||| | ||||| |||||||| Sbjct 1433855 GGCTTCATCAACAAGTTTGTGCTCTGCAAGAAGTGCAAGAACCCTGAGACCGA 1433803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946518277777