Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq135 82.4 9e-11 >seq135 Length=1177387 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCC 15113 ||||||| ||||||||| ||| || | ||||||||||| || | | || || Sbjct 452765 AGATTGGTGACAAGTTTGCTTCTCGTCACGGACAAAAGGGCACTATTGGTGTCACTTACC 452824 Query 15114 CCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCA 15173 ||||| |||||||| || ||| || || ||||||||||| |||||||||||| Sbjct 452825 GGCAGGAGGACATGCCGTTCACCAGAGAGGGAATCACGCCCGACATCATCATCAACCCCC 452884 Query 15174 ACTGCATCCCGTCCCGCATGACCAT 15198 || ||| ||||| || ||||| || Sbjct 452885 ACGCCATTCCGTCTCGTATGACAAT 452909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611390723719200