Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq86 134 2e-26 >seq86 Length=1711676 Score = 134 bits (148), Expect = 2e-26 Identities = 362/547 (66%), Gaps = 14/547 (3%) Strand=Plus/Minus Query 32675 GTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 32734 ||| ||||||||||| | | || | ||||||||||| || || |||||||| || || Sbjct 1358355 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 1358296 Query 32735 ACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGC 32794 ||||| || ||||| || ||||| ||||| | || ||||| || || || || || Sbjct 1358295 TCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATGCCCTCGACAGC 1358236 Query 32795 CGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCGC-TGTCATGTATCCACTTTTGA-- 32849 |||||||||| || | || || | || | | |||| || ||||| | || Sbjct 1358235 GGCAAAGGCAACGAGGCGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCA---TCGAAT 1358179 Query 32850 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtt 32908 ||||| ||||||||||| | ||||| || ||||| || || || ||||| ||||| Sbjct 1358178 CGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTT 1358119 Query 32909 tttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAAT 32968 | | || || | || || || || | || ||| | || || || || Sbjct 1358118 GCGCTGGCTGTGCTCCTTGATGTAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGAT 1358059 Query 32969 GTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGT 33028 ||| || || || || || ||||||||||| | |||||||| |||||| || || Sbjct 1358058 GTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCTCGCC 1357999 Query 33029 ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 33088 | || || || | | || || || || || ||||| ||| || || || |||| Sbjct 1357998 GCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAG 1357939 Query 33089 TACATGTTTTATAAAATATTTTTCGTC-TGGTGTTA---GTTTATTCCAATCATTGATAT 33144 | || || || || || ||||| | || | | | || ||||| || | | | Sbjct 1357938 GATGTGAGAGATGAAGTACTTCTCGTCATCGT-TCAGGCGGTTGTTCCAGTCGTGCAGGT 1357880 Query 33145 CTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATAT 33204 | || || | || | ||||| | ||||| || || ||||| |||||||| ||||| | Sbjct 1357879 CCTTGGACAGGTCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTT 1357820 Query 33205 TCCAGAT 33211 |||||| Sbjct 1357819 GCCAGAT 1357813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630677293200