Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq86 156 5e-33 >seq86 Length=1711676 Score = 156 bits (172), Expect = 5e-33 Identities = 379/568 (67%), Gaps = 11/568 (2%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||| ||||| || || || | ||| ||| || || | Sbjct 1358370 GCAGGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAG 1358311 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || ||||| ||||||||||| || || || ||||| ||| || || Sbjct 1358310 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAA 1358251 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 || || || || || ||||| || || | || | |||||| | || || || Sbjct 1358250 GATGCCCTCGACAGCGGCAAAGGCAACGAGGCGCTGGGCAAA---GGACGAGTTCTTGTC 1358194 Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || ||||||| | ||||| ||||| || || ||| ||||| | || || || || Sbjct 1358193 CTGGATCCATCGAATCGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGC 1358134 Query 93328 GTTAAATAGGTAATCTCGCTCG-TCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 ||| || ||||| | |||| | | | || | ||||| || ||||| | ||| || | Sbjct 1358133 GTTGAAGAGGTAGTTGCGCTGGCTGTGCTCCTTG-ATGTAAGTGTCGATGAGCAGGGAGT 1358075 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 || | || || |||| |||||||| || ||||| |||||||| || | ||| || | Sbjct 1358074 ACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGG 1358015 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 ||||| || || || | ||| || || || || ||||| || || || || | Sbjct 1358014 GAATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGG 1357955 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563 | || || || |||| || || || || | ||||| ||||| || | | || | Sbjct 1357954 CGGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 1357895 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| ||| || || || || || || | |||||| | ||||| || || || || | Sbjct 1357894 TCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGG 1357835 Query 93624 CTTTTTTGTACATATCCCATATGTCTTG 93651 | ||||||||||| | ||| || | ||| Sbjct 1357834 CCTTTTTGTACATTTGCCAGATCTGTTG 1357807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556859637553080