Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq86 118 2e-21 >seq86 Length=1711676 Score = 118 bits (130), Expect = 2e-21 Identities = 183/257 (71%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTG--CGACGCTATTCCATGCC 243559 |||||||| || || || | ||| |||| || |||| ||| ||| | || ||| Sbjct 1358422 ATCATCACCGACGCCGTCCGCATCGAGCAGGAGTT--TTTGACCGAGGCTCTGCCTTGCG 1358479 Query 243560 GGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCA 243619 || | ||||||||||| | |||||| |||||||| || || || ||||||||| Sbjct 1358480 CCCTGCTGGGCATGAACTCCAACCTCATGAAGCAGTACATTGAGTTTGTTGCCGACCGCC 1358539 Query 243620 TTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGG 243679 | | | || || || ||||||| |||||||| || |||||||||| |||||||| Sbjct 1358540 TGCTGGTTGCCCTCGGCAATGAGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTATGG 1358599 Query 243680 AGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-A 243738 || |||||| || || || || ||||||||||| ||||| ||| || || || | Sbjct 1358600 AGAACATTTCCCTGGGCGGCAAGACCAACTTCTTCGAGAAGCGCGTCGCCGACTACCAGA 1358659 Query 243739 CGCCCTGGTGTGATGAA 243755 | || ||||| ||||| Sbjct 1358660 AGGCC-GGTGTCATGAA 1358675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102877640181450