Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq86 127 2e-24 >seq86 Length=1711676 Score = 127 bits (140), Expect = 2e-24 Identities = 347/524 (66%), Gaps = 13/524 (2%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||||||||| |||||||| || || || ||| ||| || Sbjct 1358367 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1358308 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | |||||| || | ||| | ||| ||||||||| Sbjct 1358307 GGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1358248 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| ||| || || |||| ||| |||| |||||||| ||| || |||| Sbjct 1358247 GCCCTCGACAGCGGCAAAGGCAACGAGGCGCTGGGCAAAGGA---CGAGTTCTTGTCCTG 1358191 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| |||||||| | ||||| || || || || | ||||| || || | Sbjct 1358190 GATCCATCGAATCGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 1358131 Query 126283 AAAGAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 ||||| | || | | || | || |||||||| | || ||||| || || | Sbjct 1358130 GAAGAGGTAGTTGCGCT-GGCTGTGCTCCTTGATGTAAGTGTCGATGAGCAGGGAGTACG 1358072 Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 | ||| ||||| | | ||| || | ||| | ||||||| |||| || ||| Sbjct 1358071 TCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGA 1358013 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 ||||| ||||| || || | | ||||| ||||| || || || | Sbjct 1358012 ATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCG 1357953 Query 126461 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 126517 || || || |||||||| | ||||| | || || | ||||||| || | ||| Sbjct 1357952 GCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTC 1357893 Query 126518 CAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||||| || ||||| || || || | ||| || || ||||| Sbjct 1357892 CAGTCGTGCAGGTCCTTGGACAGGTCAATCTCTTCGGCGGTCCA 1357849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597352353024360