Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq138 363 2e-95 >seq138 Length=1076999 Score = 363 bits (402), Expect = 2e-95 Identities = 1094/1669 (66%), Gaps = 34/1669 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || ||||| || ||| | || ||| Sbjct 836078 AACTACCAATACTTTGGCTTCAAGACGCTGGAGCGATCATACCTTCTGAAGCTCGACGGC 836137 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||| || || || || | ||||| || ||| | || || || || Sbjct 836138 AAGATTGTCGAGCGGCCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGAC 836197 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| | | | | | |||| |||| | ||| ||| Sbjct 836198 GACATTGAGCGTGTCCTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCACGCC 836257 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 |||| ||||| ||||| || || |||||| | ||| |||| || || ||| || || Sbjct 836258 TCCCCTACCCTCTTCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCTTGGTG 836317 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | |||| ||| ||| || || | |||| || ||| ||||| | ||| Sbjct 836318 GACATGAAGGATGACAGCATTGAGGGTATCTATGACACTCTGAAGACGTGTGCCATGATC 836377 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || ||||| | | |||||| | | ||||||| || |||||| Sbjct 836378 TCCAAGATGGCTGGTGGTATCGGTTTGAACGTCCACCGCATCCGTGCCACTGGCTCCTAC 836437 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| ||||| ||||||||||||||| | |||| ||||| || |||||||||||| Sbjct 836438 ATCGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAAC 836497 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| ||||||||||| | | | ||| | ||||| |||| ||| Sbjct 836498 ACTGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCCTTCGCCATCTACCTC 836557 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 |||||||||||||| ||||| | ||| | || || || |||||||||||||| || Sbjct 836558 GAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAG 836617 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||| | ||| ||||| ||| | || || || || ||||| || Sbjct 836618 GAGGTTCGCGCCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGT 836677 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||||| |||| | ||||| || | || ||||| ||||| || || || | ||| Sbjct 836678 GTCGAGAAGAACTTGGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGCCTTGCTGAC 836737 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAG 94433 | || | ||||| | |||| | ||||| | |||| | || | | Sbjct 836738 TGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGTGGTC-G 836796 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| || |||| |||||||||| | || |||| | ||| ||||| || Sbjct 836797 TAAGACCATTCGTGCTCAGAAGCTGTGGTACTCCATTCTGGAGGCCCAGACCGAGACCGG 836856 Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 || |||| ||| | | |||||| | ||| |||| |||| ||||||| || || | | Sbjct 836857 TAACCCCTTCATGCTCTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACTTGG 836915 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || || ||||||||||| | ||||| | | || |||||| Sbjct 836916 GCACCATCCGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACTGTGCCCCCGACGAGG 836975 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 | || || || ||| ||| ||| | ||| || | || || || ||||| Sbjct 836976 TCGCCGTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGT------TGACTACA--A 837027 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT---GA 94729 | | ||| | | ||| | || ||||| | || | |||| ||||| | | Sbjct 837028 CGAGGGCTGC-TACGACTTCAAGAAGCTTCACGAAGTCAC--CAAGG-TGGTCGTCCGCA 837083 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 |||| ||| | | ||||| |||| ||||||||||| |||||| ||| ||| Sbjct 837084 ACCTCAACCGCATCATCGATGTGAACCACTACCCCGTCCAGGAGGCTCGCAACAGCAACA 837143 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || || || || ||||| |||| |||||||| | || |||||| | | ||| Sbjct 837144 TGCGCCACCGACCTATCGGTGTCGGTGTCCAGGGCCTTGCTGACGCGTTCCTCGCTCTGC 837203 Query 94850 GTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 ||||||||| || ||| ||| || ||| | |||| | | || ||||| | |||| Sbjct 837204 GTCTGCCCTTTGAGTCTCCCGAGGCTCGCGAG-CTGAACAAGCAGATCTTCGAGACCATT 837262 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 || | | ||| | || ||| | | | |||| || || || || | ||| Sbjct 837263 TACCATGCCGCCCTTGAAGCTTCCATGGAGATTGCCA---AGGTCGAGGGCCCCTATGAA 837319 Query 94969 TCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026 |||||| |||||||| || | | |||| || | |||| |||| | |||| || | Sbjct 837320 TCGTTCAAGGGATCGCC--TGCATCTGAGGGTATCCTCCAGTACGACATGTGGGACGTCA 837377 Query 95027 AGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 ||||||| | |||| || ||||| ||| | | || || | | | |||||||| Sbjct 837378 AGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGCAGA--TCAAGGAGCACGGTGT 837435 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| ||||||| || || |||||||| ||| || | |||||||| ||||| Sbjct 837436 CCGCAACAGCTTGCTTGTCGCTCCTATGCCCACTGCCAGTACCTCTCAGATCCTGGGCAA 837495 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| | ||||| |||| ||| |||||| | ||| | | || || || || || || Sbjct 837496 CAACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGA 837555 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTG 95263 |||| || ||||| || || |||||| | || | | || ||||| | Sbjct 837556 GTTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACAC-CGGCCTGTGGTCCG 837614 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATAC 95323 || | ||||||| | | || ||||||||| |||||||||| || | || | Sbjct 837615 ACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATTCCCAACATCC 837674 Query 95324 CGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | |||||||||||||| || ||||||||||| |||||||| | ||||| Sbjct 837675 CCGAGGACATCAAGGCCCTGTACAAGACCGTCTGGGAGATTTCTCAGCG 837723 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722167265320