Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq137 235 7e-57 seq135 127 3e-24 >seq137 Length=1488176 Score = 235 bits (260), Expect = 7e-57 Identities = 467/689 (68%), Gaps = 8/689 (1%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||||||| || || || || || | ||||| || |||||||| Sbjct 1204288 TCGAAGTCCTCACCACCCAAGTGAGTGTCACCGGCAGTGGACTTGACCTCGAAGATACCC 1204229 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | |||||| | | | || ||||| || ||||||||||| || || || ||||| ||| Sbjct 1204228 TCCTCAATGGTCAGGAGGGACACATCGAAGGTACCACCACCGAGATCGAAGATGAGCACG 1204169 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || ||||| || || ||||| ||||| || || || || || || Sbjct 1204168 TTGCGCTCGCCCTCGACCTTCTTGTCAAGGCCGTAGGCGATGGCAGCGGCGGTGGGCTCG 1204109 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| ||||| ||||| | || || || || || || || Sbjct 1204108 TTGATGATACGCAGGACGTTGAGGCCGGCAATGAGACCGGCGTCCTTGGTAGCCTGACGC 1204049 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || ||||| |||||||| ||||| || | ||| |||| |||| | |||| || Sbjct 1204048 TGGCTGTCGTTGAAGTAGGCGGGGACGGTGATGACGGCGTTGTTGACGGTGGTACCAAGG 1203989 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || ||| | || ||| ||||| || ||||| || || ||||| || | | Sbjct 1203988 TAGGCCTCGGCGGTCTCACGCATCTTGGTCAGGACCATGGAGGAGATCTCCTCGGGGGTG 1203929 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCAC-CGGG 7875 || ||| | || || || || ||||| || || | ||| || | || | | Sbjct 1203928 AAGGTCTTCTTCTCGCCCTTGAACTCAACCTCGATGACGGGCTT----GGAGTTCTTGTC 1203873 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 ||| ||||| | | | | ||||| ||| | ||||||| |||| | ||||| | Sbjct 1203872 GATGACCTTGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCAGGGTCGGCGAACTTGCG 1203813 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 || || | ||||| || || || || ||||| | |||||||||||| |||||||| Sbjct 1203812 GCCAATCAACCGCTTGGCGTCGAAGACGGTGTTCTGGGGGTTCATGGCGACCTGGTTCTT 1203753 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || || || ||||| || | || || || || ||| |||| || ||||| Sbjct 1203752 GGCGGCATCACCAATCAGACGCTC---GGTGTCGGTGAAGGCAACGAACGAGGGCGTCGT 1203696 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 ||| || || |||||||| || || || || ||||| | | ||| |||||||| Sbjct 1203695 TCGGTTGCCCTGGTCGTTGGCGATGATATCACATCGGTCCTCACGGAAGATACCGACGCA 1203636 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGA 8144 || || || || || | || ||||||| Sbjct 1203635 TGAGTAGGTAGTACCCAGGTCGATACCGA 1203607 >seq135 Length=1177387 Score = 127 bits (140), Expect = 3e-24 Identities = 359/545 (66%), Gaps = 15/545 (3%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| ||||| |||||||| |||| | ||| || | || ||| | | || Sbjct 782912 AGCTCCTCGAAACGAGCACGGGTGATGGTCATGGTGAAGTCCTCACCCTCGAAGAGAGAG 782971 Query 7304 TCAATTTCAATGGTTGTTTGTGC--CGTCGAAGATAACGTTCGCTTTGCGCGCTCACACG 7361 ||||| |||||||| | || || || | ||| || ||||| || ||||| || | Sbjct 782972 TCAATCTCAATGGTGGCCTGGGCACCGCTGGAGAGG--GTACGCTTGGCACGCTCGCAAG 783029 Query 7362 CCGTTCGTAAACGACGAAGGGCACGCGGGT---TACCGGAAATATCTTTCTTATGTTTAC 7418 | || || | | || || ||||| |||| | | || || ||||| || | Sbjct 783030 CAGTGCGGAGTCTTCGCAGAGCACGGGGGTCGTTGCTGGGG---TCCTTCTTGGTCTTGC 783086 Query 7419 GTTTAAACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAG 7477 | | ||||| | | |||| |||| | || | | ||||| || | ||||||||| Sbjct 783087 GAGTGAACTCCTTCTTGCAGTGGTCGA-GCAGGTTGGTGTCGAAGTCCTGGCCACCCAAG 783145 Query 7478 TGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAA 7537 || || || || ||||| || ||||| |||| ||| || | ||||| | | || Sbjct 783146 TGGGTGTCACCGGCGGTAGCCTTGACAGTGAAGACACCACCCTGGATGTTCAGGAGGGAG 783205 Query 7538 ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC---TTTG 7594 ||||| || |||||||||||||| || | || || ||||| || | ||| ||| Sbjct 783206 ACATCGAAGGTACCACCACCCAGATCGTAGATCAGGACGTTGCGCTCCTTGTCAGTCTTG 783265 Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 | | |||||||| ||||| || || || || || || || || ||||| || | Sbjct 783266 CCGGCACCCAGACCGTAGGCGATGGCAGCAGCGGTAGGCTCGTTGATGATACGGAGGACG 783325 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 || |||||||| || | | ||||| || || || || || || ||||| |||||| Sbjct 783326 TTGAGGCCAGCGATGGCACCAGCATCCTTGGTAGCCTGACGCTGGTTGTCGTTGAAGTAG 783385 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || | ||| || | | || ||||| || || | | || || || || Sbjct 783386 GCAGGGACGGTGATGACAGCCTTCTCAACCTTCTTGCCAAGCTTGGTCTCGGCAATCTCC 783445 Query 7775 TTCAT 7779 ||||| Sbjct 783446 TTCAT 783450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635131474160280