Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq138 235 7e-57 seq86 134 2e-26 seq124 96.9 4e-15 >seq138 Length=1076999 Score = 235 bits (260), Expect = 7e-57 Identities = 931/1439 (65%), Gaps = 43/1439 (3%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | || ||| || || || ||||| ||| Sbjct 836153 CCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 836212 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||||||| || |||||| | | |||| |||||| | || ||||||||| Sbjct 836213 CTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCACGCCTCCCCTACCCTCTTC 836272 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || |||||||| || | |||| ||||| || ||| | | | | ||||| || Sbjct 836273 AATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCTTGGTGGACATGAAGGATGAC 836332 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || || | |||||| | |||||| ||||| ||| ||||||| Sbjct 836333 AGCATTGAGGGTATCTATGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTGGT 836392 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTAT-TAGA-GGTACAA 111909 |||||||| || || |||| || | |||| | ||| || | | || || | Sbjct 836393 GGTATCGGTTTGAACGTCCACCGCATCCGTGCCACT--GGCTCCTACATCGCCGGCACCA 836450 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || ||||| || ||||| || || || ||| ||| || || || | Sbjct 836451 ACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATACG 836510 Query 111970 TAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGGC 112023 | |||| | ||| ||||| || | |||| |||| || ||||| |||| Sbjct 836511 TCGACCAGGGTGGCAACAAGCGTCCT---GGTGCCTTCGCCATCTACCTCGAGCCCTGGC 836567 Query 112024 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGT 112083 |||| || || | || |||||||| | || ||||| || | ||||||| || Sbjct 836568 ACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAGGAGGTTCGCG 836627 Query 112084 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 112143 |||||| | ||| ||||| ||||| || ||||||||||||||| | || ||| ||| Sbjct 836628 CCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAAGA 836687 Query 112144 --GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCGTGG 112200 ||| | ||| | ||| | || || || || || || || || | || | | Sbjct 836688 ACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTACG 836744 Query 112201 GTGAGGAGTTTGAAGCCCTCTACACAAAGTACGA---GGAAGAAAGTCGGGCGACTGCGA 112257 | ||||||||||| || || ||| ||||||||| ||| | | || || || | || Sbjct 836745 GCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGT-GGTCG--TAAGA 836801 Query 112258 CGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACA 112316 | | | ||| | || | ||||| | | ||||| || | || |||||||| |||| Sbjct 836802 CCATTCGTGCT-CAGAAGCTGTGGTACTCCATTCTGGAGGCCCAGACCGAGACCGGTAAC 836860 Query 112317 CCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTG 112376 || | ||||| ||||| ||| ||| |||| ||||| || || ||||| ||||| Sbjct 836861 CCCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACC 836920 Query 112377 ATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCT 112436 ||| || || |||||||| || || ||| | || | | | || ||| || Sbjct 836921 ATCCGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACTGTGCCCCCGACGAGGTCGCC 836980 Query 112437 GTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--AT 112494 || || ||| | || || | || || ||| | ||| || | | | || | | | | Sbjct 836981 GTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTTGA-CTACA-ACGAGGGCTGCT 837038 Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 || | | || || |||||||| || || ||| ||||| ||| | | | Sbjct 837039 ACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGCAACCTCAACCGCATCA 837098 Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 | ||| || |||||||| || ||||| || || ||| | ||||| || | Sbjct 837099 TCGATGTGAACCACTACCCCGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGACCTA 837158 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGAT 112673 | ||| |||||||||| || || || || | ||| | || || || | | ||||| Sbjct 837159 TCGGTGTCGGTGTCCAGGGCCTTGCTGACGCGTTCCTCGCTCTG-CGTCTGCCCTTTGAG 837217 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || ||| || || | || || || || ||||| || || || ||||| ||| Sbjct 837218 TCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCGCCCTT 837277 Query 112734 GAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 || || ||| |||| | || |||| || || || |||||| | || |||| || Sbjct 837278 GAAGC---TTCCATGGAGATTGCCAAGGTCGAGGGCCCCTATGAATCGTTCAAGGGATCG 837334 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 || || || | || | || || | || |||||||| | || || | | Sbjct 837335 CCTGCATCTGAGGGTATCCTCCAGTACGACATGTGGGACGTCAAGCCCTCCGACCTGTGG 837394 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTT--TTGA 112908 || |||||| | |||||||| | ||||||||| | ||| | || ||||| ||| ||| Sbjct 837395 GAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAG-CTTGCTTG- 837452 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAAC 112968 | || || ||||| || ||| ||| | || ||| |||| || || |||||||| || | Sbjct 837453 TCGCTCCTATGCCCACTGCCAGTACCTCTCAGATCCTGGGCAACAACGAATGCTTCGAGC 837512 Query 112969 CCTACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 ||||||| | |||||||| | | || | ||| || || ||||| | |||||||| Sbjct 837513 CCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTCAAC 837571 >seq86 Length=1711676 Score = 134 bits (148), Expect = 2e-26 Identities = 177/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 102090 CTCTTTGAAGCCATCCAAACAGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 102149 ||||| | ||||| | || |||| || |||| ||||| || || ||||| || Sbjct 1358125 CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCGATTCGA 1358184 Query 102150 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 102208 ||| | | |||| | ||| ||||||| |||| ||| | || ||||| ||| || Sbjct 1358185 TGGATCCAGGACAAGAACTCGT-CCTTTGCCCAGCGCCTCGTTGCCTTTGCCGCTGTCGA 1358243 Query 102209 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 102268 ||| ||||||||| ||| |||| | | || | ||||||||||||||||||||||| Sbjct 1358244 GGGCATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCAT 1358303 Query 102269 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 102328 ||| || || ||| ||||||||||| ||||||||||||||||| || ||| || || Sbjct 1358304 GCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTT 1358363 Query 102329 TGC 102331 ||| Sbjct 1358364 TGC 1358366 >seq124 Length=860675 Score = 96.9 bits (106), Expect = 4e-15 Identities = 182/262 (69%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 16064 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 16123 ||| || || || |||||||||| |||||| || ||| | || | | | || | Sbjct 195154 GGCGTCGATTTCGTCAATGAAGATGATGCAGGGCGCATTCTTTCGGCCTTCCGCGAACAA 195095 Query 16124 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 16182 || || ||||| | |||||| |||||||||||||||||||| | | || || Sbjct 195094 GTCTCGCACACGAGAAGGGCCCACGCCAACAAACATCTCCACAAACTCGGATCCGCTCAC 195035 Query 16183 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 16242 || | |||||| || ||| || || ||| |||| ||| ||||| ||||| || | Sbjct 195034 GCTGAA-GAAGGGCACGCCAGACTCTCCAGCAGTGGCCTTGGCAAGAAGCGTCTTTCCTG 194976 Query 16243 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 16299 | ||||| ||| ||||| | ||| || || ||||||||||| || |||| | || | Sbjct 194975 TTCCTGGAGGACCGGCGAGAATGGCGCCGCGAGGAATCTTGGCACCCAGCTTCTCGAACT 194916 Query 16300 ATCTCTCAGGTTGCTTAAGAAA 16321 ||||||||||||| || || Sbjct 194915 ---TCTCAGGTTGCTTCAGGAA 194897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620741104200240