Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq138 251 8e-62 >seq138 Length=1076999 Score = 251 bits (278), Expect = 8e-62 Identities = 1102/1720 (64%), Gaps = 53/1720 (3%) Strand=Plus/Minus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT---ACACTTT 109563 ||||| ||||| |||||||| |||||||||||||||||| | || || || || Sbjct 837777 GACTGGGACTGGTCGATGAAAGCACCACGATCAGCCGCCATCTGGACAATTTGACGCT-- 837720 Query 109564 TGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATG 109623 | ||| |||||||| |||||||||| |||||| || ||||| |||| ||| Sbjct 837719 -GAGAAATCTCCCAGACGGTCTTGTACAGGGCCTTGATGTCCTCGGGGATGTTGGGAATG 837661 Query 109624 TTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCG 109683 || || || ||||| | | ||| | | |||||| | | ||||| || ||| Sbjct 837660 TTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGTCGGACCACAGGCCG 837601 Query 109684 ACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743 | || || | | ||| |||||| || || ||||||||||| Sbjct 837600 GTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCACCAGCAAGGACA 837541 Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 ||||| |||||||||| | |||||||| ||||| || || |||||||| ||||| || Sbjct 837540 CGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGA 837481 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTT 109863 | || || |||||||| ||||| | || | ||||| |||| ||| | | ||| Sbjct 837480 GAGGTACTGGCAGTGGGCATAGGAGCGACAAGCAAGCTGTTGCGGACACCGTGCTCCTTG 837421 Query 109864 ACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT-CTCACCATCCCA 109922 | | |||| | | |||||| || |||| || || | ||||| Sbjct 837420 ATCTGCTCCTTGAGGGAGTCCCACTC-------CCACAGGTCGGAGGGCTTGACGTCCCA 837368 Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 ||| || || || | |||||||| ||||| || |||||||| || || | || Sbjct 837367 CATGTCGTACTGGAGGATACCCTCAGATGCAGGCGATCCCTTGAACGATTCATAGGGGCC 837308 Query 109983 CTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAAT 110042 ||| |||| ||| | ||| ||||| || || || ||||| || || ||||| || || Sbjct 837307 CTCGACCTTGGCAATCTCCATGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGAT 837248 Query 110043 ATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACA 110101 || |||| ||||| ||| | | || ||||| |||| || || | ||| Sbjct 837247 CTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTCAAAGGGCAGACG-CAGAGCGAGGAACG 837189 Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 | || || || ||||| ||||||| ||| || || || || |||||| | |||| Sbjct 837188 CGTCAGCAAGGCCCTGGACACCGACACCGATAGGTCGGTGGCGCATGTTGCTGTTGCGAG 837129 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | | |||||||| ||| ||||||| || ||||| || || || Sbjct 837128 CCTCCTGGACGGGGTAGTGGTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCT 837069 Query 110222 TCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATTG---ACATATT 110278 | |||| ||| || || || | | | ||| | | | ||| || | | ||| | Sbjct 837068 TGGTGACTTCGTGAAGCTTCTTGAAGTCGTA-GCAGCC--CTCGTTGTAGTCAACAAAGG 837012 Query 110279 TGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCA 110338 ||| || || | ||| || | ||||| || | |||||| | | ||| || | Sbjct 837011 CGGGAAGGGCCAGAGAGGCCAAGTTGCAGACGGCGACCTCGTCGGGGGCACAGTACTCAA 836952 Query 110339 AAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGG 110398 || || || || | ||| || || ||| |||||||||||||| || ||| Sbjct 836951 TGATCTCGGTGCAGAGGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTTGC 836892 Query 110399 AGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAA 110458 |||||| ||||| ||||||||| | ||| |||| || || ||||| | || |||| Sbjct 836891 GGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCCAGAA 836832 Query 110459 TGGCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGAGACCTTCCTCCTCGT 110515 ||| | ||| | | || | | | | | || | || | | | || ||| ||||| Sbjct 836831 TGGAGTACCACAGCTTCTGAG-CACGAATGGTCTTACG--ACCACGTCCCTCCCTCTCGT 836775 Query 110516 ACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-G 110574 |||| ||||| ||||||| |||| ||||| |||| ||| || || || | Sbjct 836774 ACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGGCCAGG-GCATTCG 836716 Query 110575 TCGGGACAGAAGAGGGACCAATTTCCACCCTC--CTCAACCCTCTTCATGAACAGGTCAG 110632 | ||| || | ||| | ||| | ||| || ||| || | ||||||||| || || | Sbjct 836715 TTGGGGCACATGAGCGTCCAGT--CCAAGTTCTTCTCGACACGCTTCATGAAGAGATCGG 836658 Query 110633 GAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGC 110692 | ||||||| || ||| | ||| ||| ||| |||| || | || ||||| || Sbjct 836657 GGATCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGC 836598 Query 110693 GTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATC 110752 | || || | ||||| | || || | |||||| || ||||| |||| |||| || | Sbjct 836597 GGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCAC 836538 Query 110753 CCTTACGACGA------CCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGA 110806 | | |||| || |||||| || || || || ||| |||||||| | | Sbjct 836537 C---AGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCA 836481 Query 110807 GCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCAC 110866 |||| || ||||| || | ||| || || || || || ||| | |||||| Sbjct 836480 GCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCAC 836421 Query 110867 GAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCT 110925 | ||| ||||| | || ||| |||||||| ||| ||| || |||||| ||| Sbjct 836420 GGATGCGGTGGACGTTCAAACCGATACCACCAGCCATCTTGGAGATCATGGCACACGTCT 836361 Query 110926 GTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAA 110985 | || || |||| ||||| ||||| || |||| || | | | ||||| || Sbjct 836360 -TCAGAGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGTCCACCAAGAAGCATGAG 836302 Query 110986 GACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGA 111045 |||| ||| | | || || || ||||||||||| ||||| | || || ||| ||| Sbjct 836301 GACAGCTGGGCTTGCGGGGTACCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGA--AGA 836244 Query 111046 CCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGT--ACATCTTTACCGTGAAT 111101 |||| |||||| || |||||| ||||| | | | | | || | || || Sbjct 836243 ACTTGCTGGACATGAGGTGGTATGTCTCGAGGAC--ACGCTCAATGTCGTCTCCCCAGAT 836186 Query 111102 ACCAATGGCAACTCGCATGAACATATATTGAGGCGTTTCGATTAGCTTTCCATCAACACG 111161 |||| ||| |||||||||| ||| | || ||| |||| | ||| || || | Sbjct 836185 GCCAACGGCCACTCGCATGATCATGTGCTGTGGCCGCTCGACAATCTTGCCGTCGAGCTT 836126 Query 111162 CTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTAT 111201 | ||||||| ||| || ||||||| ||||||||| Sbjct 836125 CAGAAGGTATGATCGCTCCAGCGTCTTGAAGCCAAAGTAT 836086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974770512600