Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq138 217 2e-51 seq86 102 1e-16 seq124 87.8 2e-12 >seq138 Length=1076999 Score = 217 bits (240), Expect = 2e-51 Identities = 929/1438 (65%), Gaps = 55/1438 (4%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 |||||||| | ||||| || || ||| | || | | |||||||| | |||||||| Sbjct 837571 GTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGG 837512 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || |||||||| || || |||| ||| || | ||| ||| || ||||| || || | Sbjct 837511 CTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGA- 837453 Query 106015 CAA--AAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCG 106072 ||| ||| ||||| || | ||| | |||||||| | |||||||| ||||| || Sbjct 837452 CAAGCAAG-CTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCC 837394 Query 106073 TA---GTTG-AGCTTGGTTTCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 | || | || || || || | ||||||| || | || || | || | || | Sbjct 837393 CACAGGTCGGAG---GGCTTGACGT-CCCACATGTCGTACTGGAGGATACCCTCAGATGC 837338 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 || || |||| || | ||||||| || | | | | || | || | || || Sbjct 837337 AGGCGATCCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCATGGAAGCTTC 837278 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 |||| || || || ||||| || ||||| | |||| ||| || || || Sbjct 837277 AAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGA 837218 Query 106249 ATCAAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAA 106307 ||||| | | || ||| | | || | || || || || || ||||| | ||| | Sbjct 837217 CTCAAAGG-GCAGACGCAGAGCGAGGAACGCGTCAGCAAGGCCCTGGACACCGACACCGA 837159 Query 106308 TAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAA 106367 |||||| ||| ||||| || || || || || ||||| || || || | Sbjct 837158 TAGGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTGGACGGGGTAGTGGTTCACATCGA 837099 Query 106368 TGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAA 106427 ||| ||||| || || | || | ||| |||| ||| ||||| || | | || Sbjct 837098 TGATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGT 837039 Query 106428 AAGTGCGAGTCTCTTCATTG---ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAA 106484 | || ||| | | | ||| | |||||||| | || ||||| ||||| | Sbjct 837038 AGCAGCC---CTCGTTGTAGTCAACAAAGGCGGGAAGGGCCAGAGAGGCCAAGTTGCAGA 836982 Query 106485 CAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAA 106544 | || ||| || | |||||| | || || || || | ||| || || | Sbjct 836981 CGGCGACCTCGTCGGGGGCACAGTACTCAATGATCTCGGTGCAGAGGTTAGAGCTGCGGA 836922 Query 106545 TCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGG 106604 | || ||||| ||||| ||||| ||||| |||||| ||||||||||||||| ||| Sbjct 836921 TGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGG 836862 Query 106605 GCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACACATCGGCGGCTG-GTAC- 106662 | | || ||||| ||||| | || ||||| | | ||||| || ||| | || Sbjct 836861 GGTTACCGGTCTCGGTCTGGGCCTCCAGAATGGAGTACCACA-----GCTTCTGAGCACG 836807 Query 106663 AATGGCGTT--GGCC-CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTC 106719 ||||| || | || ||||||||| |||||||||| ||| || || ||||||||||| Sbjct 836806 AATGGTCTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTC 836747 Query 106720 ACCCACCGCGTCGGAGAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCAC 106778 || ||| | || || || || || || || || | || | ||| | ||| Sbjct 836746 GCCGTAGCAGTCAGCAAGGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCAGT--CCAA 836690 Query 106779 CCTC--CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGG-ATGAAAAGAGATCTC 106835 || ||| || ||||||||||| || || || |||||||| | | | || || || | Sbjct 836689 GTTCTTCTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAG-TCGC 836631 Query 106836 TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCG 106895 ||| |||| || | || ||||| || | |||||||| || | || || | Sbjct 836630 GGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGG 836571 Query 106896 CGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGAT 106949 ||||||| ||||| || |||| |||| | || ||||| ||| | || | Sbjct 836570 CGTGCCAGGGCTCGAGGTAGATGGCGAAGGCACCAG---GACGCTTGTTGCCACCCTGGT 836514 Query 106950 TTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGAC 107009 || || || || ||| ||| || || || ||||| || ||||| || | || | Sbjct 836513 CGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGC 836454 Query 107010 CATTTGTCCCC-CGAA-TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAAT 107067 | || || || ||| || ||| | |||| | | |||| || || || || Sbjct 836453 CGTTGGTGCCGGCGATGTAGGAGCC--AGTGGCACGGATGCGGTGGACGTTCAAACCGAT 836396 Query 107068 ACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGAT 107127 ||| |||||| ||| ||||| |||||| | | ||||| |||||||||| | || Sbjct 836395 ACCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTCAAT 836336 Query 107128 TGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGC 107187 ||| ||||| || | | | |||||| ||||| ||| | | || |||||||| Sbjct 836335 GCTGTCATCCTTCATGTCCACCAAGAAGCATGAGGACAGCTGGGCTTGCGGGGTACCAGC 836276 Query 107188 ATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTC 107245 |||||||||||| || | ||||| ||| | | |||| |||||| || ||||||| Sbjct 836275 ATTGAAGAGGGTAGGGGAGGCGTGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTC 836218 Query 107246 TCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 || | |||| |||||||| || || |||||| | |||||| ||||| | ||||| Sbjct 836217 TCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATGATCATGT 836160 >seq86 Length=1711676 Score = 102 bits (112), Expect = 1e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| ||| ||| |||||||| || || || || || || || || ||| ||||| Sbjct 1358367 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1358308 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 ||||||||||| |||||||| | ||| | || | | || | ||| ||||||||| Sbjct 1358307 GGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1358248 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 ||||| ||| ||||| |||| ||||||| ||| ||||| |||| |||| | | Sbjct 1358247 GCCCTCGACAGCGGCAAAGGCAACGAGGCGCTGGGCAAAGGA-CGAGTTCTTGTCCTGGA 1358189 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479 |||| || ||||| | |||||||| Sbjct 1358188 TCCATCGAATCGCCCAGTCGGCCTTCTT 1358161 >seq124 Length=860675 Score = 87.8 bits (96), Expect = 2e-12 Identities = 133/184 (72%), Gaps = 8/184 (4%) Strand=Plus/Minus Query 9449 GCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGATGAAGGGGACAT 9507 |||||| |||||||||||||||||||| | | || || || | |||||| || Sbjct 195076 GCCCACGCCAACAAACATCTCCACAAACTCGGATCCGCTCACGCTGAA-GAAGGGCACGC 195018 Query 9508 TAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGA 9567 ||| || || ||| |||| ||| ||||| ||||| || || ||||| ||| |||| Sbjct 195017 CAGACTCTCCAGCAGTGGCCTTGGCAAGAAGCGTCTTTCCTGTTCCTGGAGGACCGGCGA 194958 Query 9568 GGAGGGCACCCCGTGGAATCTTGGCGCC--ACTTC-CAAAGTATCTCTCAGGTTGCTTGA 9624 | | ||| || || ||||||||||| || |||| | || | ||||||||||||| | Sbjct 194957 GAATGGCGCCGCGAGGAATCTTGGCACCCAGCTTCTCGAACT---TCTCAGGTTGCTTCA 194901 Query 9625 GAAA 9628 | || Sbjct 194900 GGAA 194897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589979568415080