Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13]
167 sequences; 32,472,817 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq140 123 2e-23
>seq140
Length=1272624
Score = 123 bits (136), Expect = 2e-23
Identities = 152/205 (74%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 29766 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 29825
||| || || | ||||| | ||||||||| |||| ||| | || | ||| || | |||
Sbjct 1078411 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTA 1078352
Query 29826 GACGTGAGCGTCTCCCAGGGTGTGGACAAA-CTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884
|||||| |||||||||| | |||| | ||| ||||| | || || ||||| |
Sbjct 1078351 GACGTGCGCGTCTCCCATGACGTGGGTGAGGCTC-CCCGGCACCAGATCGCACACGTGGG 1078293
Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944
| | ||||| |||||| || | |||||| || ||||| ||||| | |||||||||||||
Sbjct 1078292 CGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGT 1078233
Query 29945 CCCCCGACCTCTGGTAGAGCTGACA 29969
| | |||| |||||||||||| ||
Sbjct 1078232 CGCAGGACCGCTGGTAGAGCTGGCA 1078208
Score = 111 bits (122), Expect = 1e-19
Identities = 256/380 (67%), Gaps = 8/380 (2%)
Strand=Plus/Minus
Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067
||||||| || || || ||||| | ||||| |||||||| |||| | || |
Sbjct 1078112 TGTGGCAGGGCGGGAGGGCCATCTTGTTGAAGTCGCGCGGGTTCCACGCGCTGAGTATCA 1078053
Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGCTGATCCACCC 30127
| |||||||| | |||||| | | | || ||| | |||||| || || |
Sbjct 1078052 TCCGCCTGTCATACGGGTTGGTGCGCAGCTTGTGGACGATCTCGGCCAGCTGGTCGACGC 1077993
Query 30128 CCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGA 30187
|| | || | |||||| | | ||| |||||| || || || |||| ||||||||
Sbjct 1077992 CCTTGCCGGCGTAGTCGGTGTTGGCGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGGA 1077933
Query 30188 ACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAA 30247
| ||||| || || |||||||| || | || | |||| | | ||| |||| | |
Sbjct 1077932 AGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCGCCAGGCCGACGCTGTCGAGGA 1077873
Query 30248 AGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCTCGGAGAGCTCTTTG-- 30303
| || | ||| |||||| ||||||||||||| || || | || | ||| || ||| |
Sbjct 1077872 ACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGCTGAGGGC-CTTGGAC 1077814
Query 30304 GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTTCCAAAAGACC 30363
||| | || ||||| || |||||| || ||||| | |||||||| |||||
Sbjct 1077813 GAGGTGTTG--CCCTC-GATGAACCAGAGGAGCTCGGCGACGACGGCGCGGAGGAAGACG 1077757
Query 30364 CTCTTGGTCGTGAGGAGGGG 30383
| ||| || |||||||||||
Sbjct 1077756 CGCTTCGTGGTGAGGAGGGG 1077737
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408616768335491
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |