Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq140 107 2e-18 >seq140 Length=1272624 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326 ||||||||||| || || || || ||||| |||| || |||| | |||| || | ||| Sbjct 763326 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCATCCTCAAGCTGC 763385 Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386 || || || || || | |||||| || || || |||||||| || || || || || || Sbjct 763386 TTTCCAGCGAAGATGAGACGCTGCTGGTCAGGGGGAATGCCCTCCTTGTCCTGGATCTTG 763445 Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446 || ||| | || | ||||| |||| || || || || |||| || |||||||| Sbjct 763446 GACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTG 763505 Query 101447 AAAGTTTTTACAAATATCTGCATG 101470 | || || || || ||||||||| Sbjct 763506 AGGGTCTTGACGAAGATCTGCATG 763529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396277593449619