Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq138 450 3e-121 seq86 232 1e-55 >seq138 Length=1076999 Score = 450 bits (498), Expect = 3e-121 Identities = 1257/1890 (67%), Gaps = 104/1890 (6%) Strand=Plus/Minus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || |||| || |||| ||| || || ||||||||||||||||| Sbjct 837912 ACGGTGAACTGGATAGGCGCAGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 837853 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTGTGAGTTTCTTCAGCTTAATATTC 212669 || || ||| ||||||| | |||||| |||| |||| || Sbjct 837852 AGACCGAGCTT---CCAGCCGGTGAAGTGCAT-GCTGG--------------TAATCTT- 837812 Query 212670 TGGTCATCCTCGTGGCCCAGATGTAG--GTTCAGGGACTGACTCTGGTCTATGAATGGGG 212727 | |||| | | | || |||| | ||| |||||||| |||||| ||||| | Sbjct 837811 -GCCCATCGTGGGGTCCTTCATGTGGATGTTGAGGGACTGGGACTGGTCGATGAAAGCAC 837753 Query 212728 CCCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGA 212787 | | ||||| ||||| | | || | | ||| || | |||||| ||||||||| | | Sbjct 837752 CACGATCAGCCGCCATCTGGACAATTTGACGCTGAGAAATCTCCCAGACGGTCTTGTACA 837693 Query 212788 TTTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA 212847 | |||| |||||| |||| | ||| |||||||| | || || || | | | || Sbjct 837692 GGGCCTTGATGTCCTCGGGGATGTTGGGAATGTTCTGGATGGAGCC---GT-TCTCGGCA 837637 Query 212848 --GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGG 212903 | ||| | |||| | ||| ||| ||||| || ||||| ||||| || Sbjct 837636 ATGATGCGGTTCTTCATGGCGTCGGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGC 837577 Query 212904 TGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTG 212963 |||||||| | |||||| ||||| | || || | | |||||| | ||| |||||| Sbjct 837576 CAGGGGTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTG 837517 Query 212964 TAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGA 213023 |||||||||| || |||||||| ||||| ||||| | || ||||| |||||||| ||| Sbjct 837516 TAGGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAGGTACTGGCAGTGGGCATAGGA 837457 Query 213024 GCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCC 213081 || || || | ||||| | || |||||||| ||| | | || || | Sbjct 837456 GCGACAAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTG-CTCCTTGAGGG------- 837405 Query 213082 AGTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGC 213141 ||||||| || ||| |||||| | ||| |||| ||||||||| |||| | ||| | Sbjct 837404 AGTCCCA-CTCCCA--CAGGTCGGAGGGCTTGACGTCCCACATGTCGTACTGGAGGATAC 837348 Query 213142 CTTT-GCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 | | | | || | | |||| | | || |||||||| | ||||||| | ||| Sbjct 837347 CCTCAGATGCAGGCGAT-CCCTTGAACGATTCATAGGGGCCCTCGACCTTGGCAATCTCC 837289 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 ||| || | ||||| || | ||| ||||| || || |||| | |||| |||| Sbjct 837288 ATGGAAGCTTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGA 837229 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| ||||||| || ||| ||||| | ||||| || |||||||| Sbjct 837228 GCCTCGGGAGACTCAAAGGGCAGACGCAGAGCGA-GGAACGCGTCAGCAAGGCCCTGGAC 837170 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTG-GAGCACTCCTCCAAGGGGTAAA 213378 |||| ||||| |||| ||| | || ||| ||| |||| ||||| | |||||| Sbjct 837169 ACCGACACCGATAGGTCGGTGGCGCATGTTGCTGTTGCGAGC-CTCCTGGACGGGGTAGT 837111 Query 213379 AGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGT 213438 ||| |||||||| ||||||||||||| | |||| |||||||| | | || | Sbjct 837110 GGTTCACATCGATGATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCT 837051 Query 213439 ACTCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGC 213492 || |||| |||||| || || | ||||| | || ||||| | Sbjct 837050 TCT------TGAAGTCGTAGCAGCCCTCGTTGTAGTCAACAAAGGCGGGAAGGGCCAGAG 836997 Query 213493 TGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACA 213552 ||||| |||||| ||||| ||||| | | | | |||||| |||||||||||||| | Sbjct 836996 AGGCCAAGTTGCAGACGGCGACCTCGTCGGGGGCACAGTACTCAATGATCTCGGTGCAGA 836937 Query 213553 GGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAA-TCC 213611 |||| || ||||||||||||| ||||| ||||| ||| ||| | |||| ||| Sbjct 836936 GGTTAGAGCTGCGGATGGTGCCCAAGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGGTCC 836878 Query 213612 TTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGG 213671 |||||||||||| ||||| |||||||| ||||| | |||| || | ||| || Sbjct 836877 TTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGGGCCTCCAGAATGGAGTACCACAGC 836818 Query 213672 TACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAG 213730 | | || || | | || || | || | | | |||||||| |||||| || Sbjct 836817 TTCTGAGC----ACGAATGGTCTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAG 836762 Query 213731 CTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACAC 213785 | | || || | ||| || | ||| || | || |||| || || || ||| Sbjct 836761 AGCCTCAAACTCCTCGCCGTAG---CAGTC-AG-CAAGGCCAGGGCATTCGTTGGGGCAC 836707 Query 213786 ATGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAG 213844 ||||| |||||||| || | |||| ||| | || |||||| || || |||| |||||| Sbjct 836706 ATGAGCGTCCAGTCCAAGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGGATCCACAG 836648 Query 213845 CGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAG 213904 || ||||| ||| | || | ||| ||| || ||| ||||| ||||| || Sbjct 836647 AGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCCGTGGTTCTTGCGGAGATCAAG 836588 Query 213905 AAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT 213964 |||||||||| ||| |||||||| ||||| | ||||||||| ||||| || || | ||| Sbjct 836587 GAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCGAAGGCACCAGGACGCTT 836528 Query 213965 G---CCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAG 214021 | || |||||||| || | ||| ||||||||| ||||| | ||| | | Sbjct 836527 GTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAAT 836468 Query 214022 CCCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCAT 214081 |||||||| |||||||| || || || || ||||| | ||| | || ||| | Sbjct 836467 GCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCCAGTGGCAC---GGATGCGG-T 836412 Query 214082 GGAG----AGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCT 214137 ||| | || || ||||| || ||||||||||||||| || | ||| ||| | Sbjct 836411 GGACGTTCAAACCGATACCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGT 836352 Query 214138 CCATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGG 214197 | ||| || | ||||||||||| | | || || ||||||||| || |||| || Sbjct 836351 CATAGATACCCTCAATGCTGTCATCCTTCATGTCCACCAAGAAGCATGAGGACAGCT-GG 836293 Query 214198 GCCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAG 214256 || || | | |||| ||||| || || ||| ||| ||| | | |||||| | || Sbjct 836292 GCTTGCGGGGTACCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCTGGAC 836233 Query 214257 AGGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC 214316 | ||| ||| ||||| ||||| ||||||| ||| | || ||| Sbjct 836232 ATGAGGTGGTATGTCTCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACGGC-CAC 836174 Query 214317 -CTCATCAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTA 214372 | ||| | ||||||||| |||| || | || || | | | ||| || ||||| Sbjct 836173 TCGCATGATCATGTGCTGTGGCCGCTCGACAATCTTGCCGTCGAG---CTTCAGAAGGTA 836117 Query 214373 GGAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || |||||||| |||||||| |||||||| Sbjct 836116 TGATCGCTCCAGCGTCTTGAAGCCAAAGTA 836087 >seq86 Length=1711676 Score = 232 bits (256), Expect = 1e-55 Identities = 568/849 (67%), Gaps = 24/849 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | ||||| |||||||| ||||| || ||| || |||||||| Sbjct 1358658 CTGGTAGTCGGCGACGCGCTTCTCGAAGAAGTTGGTCTTGCCGCCCAGGGAAATGTTCTC 1358599 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| ||| |||||||||| | || |||||| | ||| ||| | |||||| Sbjct 1358598 CATAAAGTCAAAGGGGTTGGACGACTTGTACACCT-TCTCATTGCCGAGGGCAACCAGCA 1358540 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || || |||| ||||| | ||||||| || ||||||||| | |||| Sbjct 1358539 GGCGGTCGGCAACAAACTCAATGTACTGCTTCATGAGGTTGGAGTTCATGCCCAGCAGGG 1358480 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| ||||| || | |||||||| ||| || | ||||| || | || | Sbjct 1358479 CGCAAGGCAGAGCCTCGGTCAAAAACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGT 1358420 Query 48078 GCTTAACGCGGGACTCTGAGGGTTTGTTGCGCAGGTGCTT---GGCATAG---AGCATGC 48131 ||| || || || | |||| ||| ||| | | || |||| || Sbjct 1358419 C----ACGAATCAC-CTCC---TTGCTGGCGC-GGTTCTTCAGGTGAGAGTGCAGCAGGC 1358369 Query 48132 AGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGAC 48191 ||||||||||| |||||| || ||||| || ||||||| ||||||| ||| || | Sbjct 1358368 AGGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGC 1358309 Query 48192 CAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGA 48251 | ||||||| || | || ||||||||||| || | || || | || |||||||| Sbjct 1358308 CGGGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGA 1358249 Query 48252 TGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGA 48311 ||||||| || || || || || ||| | || | || || | ||||||||| || Sbjct 1358248 TGCCCTCGACAGCGGCAAAGGCAACGAGGCGCTGGGCAAAGGACGAGTTCTTGTCCTGGA 1358189 Query 48312 TCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGA 48371 |||| || ||||||||| |||||||| ||||| || || ||||| ||||| || Sbjct 1358188 TCCATCGAATCGCCCAGTCGGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGA 1358129 Query 48372 AGAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATC 48430 |||| | |||| || | ||| ||| | || || || ||| | |||| || Sbjct 1358128 AGAGGTAGTTGCGCTGGCTGTGC-TCCTTGATGTAAGTGTCGATGAGCAGGGAGTACGTC 1358070 Query 48431 TCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACC 48490 || ||||| | ||||| || ||||||||| ||||||||| | ||||| | | Sbjct 1358069 TCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATC 1358010 Query 48491 TGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCA 48550 || || || | ||| | ||| | ||| ||||| ||||| || || || || || || Sbjct 1358009 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCG 1357950 Query 48551 AAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTCCA 48606 |||||||| |||| || | ||| | ||||| | | | || || ||||| Sbjct 1357949 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTCCA 1357891 Query 48607 GCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCTTT 48666 | | || | ||| ||| |||||| | ||||| | ||||||||||| || || || Sbjct 1357890 GTCGTGCAGGTCCTTGGACAGGTCAATCTCTTCGGCGGTCCAGAAGGAAGCCTCGGCCTT 1357831 Query 48667 TTTGTACAT 48675 ||||||||| Sbjct 1357830 TTTGTACAT 1357822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931530855425280