Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq140 89.7 9e-13 >seq140 Length=1272624 Score = 89.7 bits (98), Expect = 9e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972 |||| |||| || |||||||||||||| || | ||| |||||||| || || || || | Sbjct 762630 CGTCTTCCAGCTGCTTACCAGCAAAAATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCT 762689 Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032 | || || || || || || || || ||||| || ||||| ||||| || |||| Sbjct 762690 TGTCCTGAATCTTCGACTTGACGTTGTCAATGGTATCAGATGATTCCACTTCCAGGGTAA 762749 Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069 | || ||||| || | ||| || | || |||||||| Sbjct 762750 TCGTCTTACCCGTCAGTGTCTTGACAAAGATCTGCAT 762786 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905134110528600