Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq86 152 4e-32 >seq86 Length=1711676 Score = 152 bits (168), Expect = 4e-32 Identities = 224/317 (71%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | |||||||||| |||||| ||||| || Sbjct 1433803 TCGGTCTCAGGGTTCTTGCACTTCTTGCAGAGCACAAACTTGTTGATGAAGCCATCGAGA 1433862 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 ||||||| | ||| ||| ||||||| |||||||| ||| | || |||| ||| Sbjct 1433863 TGGTCCTGCAGCTTGGCGGCATCGTGGGCGCCGTTGATGATCCAACGGTCGTCCTTGGGG 1433922 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || || || |||||| | || |||||||| | || | | ||| Sbjct 1433923 TCAATGTTGGTCTGAGCACCGAGCTCGAAACCAAAGTACTTGATGACATAGGAGCCAGGA 1433982 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| | || ||||| ||||| |||||||| |||||||||||||||||||| Sbjct 1433983 CGGGCAAGAGACTGGGCGACGCTGGGCAGGTTGACGACAACAGTCTTGATGCCGTTGCCT 1434042 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||| | ||||| |||||| ||| |||||||| ||||| || || ||| Sbjct 1434043 TTGCCTTCAATCTTGGTCTGGATGCGTTCCATCTTGTAGCGATAGAAGGCATCGCTGACA 1434102 Query 34618 TTGCGGTTAACGTTCAC 34634 | |||| |||||| || Sbjct 1434103 TCGCGGCGAACGTTGAC 1434119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412840759738331