Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq135 109 2e-18 >seq135 Length=1177387 Score = 109 bits (120), Expect = 2e-18 Identities = 125/163 (77%), Gaps = 5/163 (3%) Strand=Plus/Minus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| ||||||||||| |||||||| | |||||||||| ||||| Sbjct 452925 CTCAATCAAGTGAGCGATTGTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTC 452866 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATAT-CTTCTTCAGGTACAATCAAACCAA 309802 || | ||||| | ||| |||| ||||| | || || | |||| | | | ||||| Sbjct 452865 GGGCGTGATTCC-CTCTCTGG--TGAACGGCATGTCCTCCTGCCGGTA-AGTGACACCAA 452810 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAAT 309845 |||| |||||||| |||| | |||||||||||||||||||| Sbjct 452809 TAGTGCCCTTTTGTCCGTGACGAGAAGCAAACTTGTCACCAAT 452767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951970223384776