Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq140 118 7e-22 >seq140 Length=1272624 Score = 118 bits (130), Expect = 7e-22 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | |||| || ||||||||||| || || |||||||| ||| Sbjct 762560 CCACCACGGAGACGGAGAACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 762619 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| |||| || || || ||||||||||| |||||||| || |||| Sbjct 762620 AGGGTACGACCGTCTTCCAGCTGCTTACCAGCAAAAATCAAGCGCTGCTGGTCAGGCGGG 762679 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| ||| ||| | | || | ||| | ||| || ||||||||| Sbjct 762680 ATACCCTCCTTGTCCTGAATCTTC-GACTTGACGTTGTCAATGGTATCAGATGATTCCAC 762738 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | || ||||| ||||| || | || || ||||||||||||||| Sbjct 762739 TTCCAGGGTAATCGTCTTACCCGTCAGTGTCTTGACAAAGATCTGCATA 762787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703330984640