Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq140 172 6e-38 >seq140 Length=1272624 Score = 172 bits (190), Expect = 6e-38 Identities = 500/778 (64%), Gaps = 64/778 (8%) Strand=Plus/Minus Query 146787 CATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATC 146846 |||||| || || ||| |||| ||| |||| || | |||| || || || | | | Sbjct 1078510 CATGGGAATCGACTTGTGGGGGTCGTATCCCTTGACGACAAAGTCCTCGACCTTCCAGCC 1078451 Query 146847 GTCTATGTCCTCCACCCG----CCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCC 146902 || ||| | || ||| || | ||||| |||| |||||| || || || | | Sbjct 1078450 ATCGATG-CTGCCGCCCTTTTCCCGCGCAATCTCCAGCTCGGGGAACGGCCGCGGCTCGC 1078392 Query 146903 TGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGG 146962 | ||||| | | ||||| ||| | ||||| || ||||||||||||||| |||| | Sbjct 1078391 GCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGTAGACGTGCGCGTCTCCCATGA 1078332 Query 146963 TGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCG 147022 ||| | | ||||||| || || ||||||||| | ||||| |||||||||| Sbjct 1078331 CGTGGGTGAGGCTCCCCGGCACCAGATCGCACACGTGGGCGAGCATGTGCGTGAGCAGCG 1078272 Query 147023 AGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCT 147082 |||||| || ||||||||||||| || || |||||||| | |||| |||||| |||| Sbjct 1078271 CGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGTCGCAGGACCGCTGGTAGAGCT 1078212 Query 147083 GGCA------------------------------CGAGAGCTCC---CCGTCG--GCC-- 147105 |||| |||| ||||| ||||| ||| Sbjct 1078211 GGCAGTGGAGGTGACCCTTTGGCTTGTTCTCCTCCGAGGGCTCCGGGGCGTCGACGCCGC 1078152 Query 147106 --------------------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145 ||||| |||||| | |||||||| ||||| || |||| Sbjct 1078151 GGCCGCGGCCCGGGTACGAGACGTAGAACTGGGCGAACATGTGGCAGGGCGGGAGGGCCA 1078092 Query 147146 TGGCGGGCAGGTC-CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTC 147204 | | | ||| ||| |||||||| || || | || ||||||| | ||||| Sbjct 1078091 TCTTGTTGAAGTCGCGC-GGGTTCCACGCGCTGAGTATCATCCGCCTGTCATACGGGTTG 1078033 Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 | | || | || | | ||||||||| ||||||| ||| |||||| || Sbjct 1078032 GTGCGCAGCTTGTGGACGATCTCGGCCAGCTGGTCGACGCCCTTGCCGGCGTAGTCGGTG 1077973 Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324 | ||| |||||| ||| |||||||||| ||||||||||||||| || || |||||| Sbjct 1077972 TTGGCGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGG 1077913 Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCG 147384 |||||| | | ||||| | ||| | | | ||| |||||| |||| |||| | || Sbjct 1077912 TCGCCGACGTCGCGGTGCGCCAGGCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCG 1077853 Query 147385 TCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAAC 147444 |||||||| || || | || ||| |||| || ||| |||| ||||||| Sbjct 1077852 TCCCAGATCTTGACGCCGACGTCGCTGAGGGCCTTGGACGAGGTGTTGCCCTCGATGAAC 1077793 Query 147445 CAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 ||||| ||||| | | || | | ||||| | ||| ||||| || ||||||| Sbjct 1077792 CAGAGGAGCTCGGCGACGACGGCGCGGAGGAAGACGCGCTTCGTGGTGAGGAGGGGGA 1077735 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486781968800