Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq138 280 2e-70 seq86 134 2e-26 seq124 96.9 4e-15 >seq138 Length=1076999 Score = 280 bits (310), Expect = 2e-70 Identities = 936/1435 (65%), Gaps = 35/1435 (2%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 |||||| ||||| ||||||| |||||| | || || || || |||||||| |||| Sbjct 836153 CCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTC 836212 Query 104282 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 104339 | ||||||||| || |||||| |||| | | ||| ||||| | || ||||||| Sbjct 836213 CTCGAGACATACCACCTCATGTCCAGCAAGTTCT--TCACCCACGCCTCCCCTACCCTCT 836270 Query 104340 TCAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 104399 ||||||||||||| || | |||| ||||| |||||| | | | || ||||| | Sbjct 836271 TCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCTTGGTGGACATGAAGGATG 836330 Query 104400 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 104459 || || | |||||||||| ||||| | | |||||| ||||| ||| ||||| Sbjct 836331 ACAGCATTGAGGGTATCTATGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTG 836390 Query 104460 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTAT-TCGGGGG-AC 104517 | ||||| || || || |||| | | |||| | ||| || ||| || || Sbjct 836391 GTGGTATCGGTTTGAACGTCCACCGCATCCGTGCCACTGG--CTCCTACATCGCCGGCAC 836448 Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577 || || || | || ||||| || ||||| || || || ||| ||| || || || Sbjct 836449 CAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCCCGATA 836508 Query 104578 TGTAAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATG 104631 || | || | ||| ||||| || | |||| |||| || ||||| || Sbjct 836509 CGTCGACCAGGGTGGCAACAAGCGTCCT---GGTGCCTTCGCCATCTACCTCGAGCCCTG 836565 Query 104632 GCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCG 104691 |||||| || || | || |||||||| | || ||||| || | ||||||| || Sbjct 836566 GCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAGGAGGTTCG 836625 Query 104692 GTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 104751 |||||| | ||| ||||| ||||| || ||||||||||||||| | || ||| | Sbjct 836626 CGCCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGTGTCGAGAA 836685 Query 104752 GA--GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCTGGTCTCTCCGATGCCGT 104808 || ||| | ||| | ||| | || || || || || ||||| || | || | Sbjct 836686 GAACTTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTA 836742 Query 104809 GGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGAC 104868 || ||||||||||| || || ||| |||||||||| || || || | | ||| Sbjct 836743 CGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGTGGTCGTAAGAC 836802 Query 104869 GGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 | | ||| | || | ||||| | | ||||| || | || |||||||| |||| | Sbjct 836803 CATTCGTGCT-CAGAAGCTGTGGTACTCCATTCTGGAGGCCCAGACCGAGACCGGTAACC 836861 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 | | |||||| ||||| ||| ||| |||| ||||| || || ||||| ||||| | Sbjct 836862 CCTTCATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACTTGGGCACCA 836921 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 || || || || ||||| || || ||| | || | | | || ||| || | Sbjct 836922 TCCGCAGCTCTAACCTCTGCACCGAGATCATTGAGTACTGTGCCCCCGACGAGGTCGCCG 836981 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGAC--ATT 105105 | || ||| | || || | || || ||| | ||| || | | | || | | | | Sbjct 836982 TCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTTGA-CTACA-ACGAGGGCTGCTA 837039 Query 105106 TGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTAT 105165 || | | || || |||||||| || || ||| | ||||| ||| | | || Sbjct 837040 CGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGCAACCTCAACCGCATCAT 837099 Query 105166 TGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 ||| || |||||||| || ||||| || || ||| | ||||| || || Sbjct 837100 CGATGTGAACCACTACCCCGTCCAGGAGGCTCGCAACAGCAACATGCGCCACCGACCTAT 837159 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGATT 105284 ||| ||||||| ||||| || || || | ||| | || || || | | ||||| | Sbjct 837160 CGGTGTCGGTGTCCAGGGCCTTGCTGACGCGTTCCTCGCTCTG-CGTCTGCCCTTTGAGT 837218 Query 105285 CCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTG 105344 | ||| || || | || || || || |||||||| || || ||||| |||| Sbjct 837219 CTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCGCCCTTG 837278 Query 105345 AGGCGAGTTCA--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 105402 | || | || ||| | || |||| || || || |||||| | || |||| || || Sbjct 837279 AAGC--TTCCATGGAGATTGCCAAGGTCGAGGGCCCCTATGAATCGTTCAAGGGATCGCC 837336 Query 105403 AGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTACGA 105462 || || | || | || || | || |||||||| | || || | | || Sbjct 837337 TGCATCTGAGGGTATCCTCCAGTACGACATGTGGGACGTCAAGCCCTCCGACCTGTGGGA 837396 Query 105463 CTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGC 105522 ||||| | |||||||| | ||||||||| | ||| | || ||||| | || | || Sbjct 837397 GTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAGCTTGCTTGTCGC 837456 Query 105523 TCCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTA 105582 ||| ||||| || ||| ||| | || ||| |||| || || |||||||| || ||||| Sbjct 837457 TCCTATGCCCACTGCCAGTACCTCTCAGATCCTGGGCAACAACGAATGCTTCGAGCCCTA 837516 Query 105583 CACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 ||| | |||||||| | | || | ||| || || ||||| | |||||||| Sbjct 837517 CACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTCAAC 837571 >seq86 Length=1711676 Score = 134 bits (148), Expect = 2e-26 Identities = 177/243 (73%), Gaps = 2/243 (1%) Strand=Plus/Plus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| | ||||| | || |||| || |||| ||||| || || ||||| || Sbjct 1358125 CTCTTCAACGCCATTGAGACCATTCCTTGCATTCGCAAGAAGGCCGACTGGGCGATTCGA 1358184 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGA 94832 ||| | | |||| | ||| ||||||| |||| ||| | || ||||| ||| || Sbjct 1358185 TGGATCCAGGACAAGAACTCGT-CCTTTGCCCAGCGCCTCGTTGCCTTTGCCGCTGTCGA 1358243 Query 94833 GGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCAT 94892 ||| ||||||||| ||| |||| | | || | ||||||||||||||||||||||| Sbjct 1358244 GGGCATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCAAGAAGCGAGGTCTCAT 1358303 Query 94893 GCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTT 94952 ||| || || ||| ||||||||||| ||||||||||||||||| || ||| || || Sbjct 1358304 GCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTT 1358363 Query 94953 TGC 94955 ||| Sbjct 1358364 TGC 1358366 >seq124 Length=860675 Score = 96.9 bits (106), Expect = 4e-15 Identities = 182/262 (69%), Gaps = 8/262 (3%) Strand=Plus/Minus Query 9703 GGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGAG 9762 ||| || || || |||||||||| |||||| || ||| | || | | | || | Sbjct 195154 GGCGTCGATTTCGTCAATGAAGATGATGCAGGGCGCATTCTTTCGGCCTTCCGCGAACAA 195095 Query 9763 ATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-AC 9821 || || ||||| | |||||| |||||||||||||||||||| | | || || Sbjct 195094 GTCTCGCACACGAGAAGGGCCCACGCCAACAAACATCTCCACAAACTCGGATCCGCTCAC 195035 Query 9822 ATTGGATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCG 9881 || | |||||| || ||| || || ||| |||| ||| ||||| ||||| || | Sbjct 195034 GCTGAA-GAAGGGCACGCCAGACTCTCCAGCAGTGGCCTTGGCAAGAAGCGTCTTTCCTG 194976 Query 9882 TACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAATCTTGGCGCC--ACTTC-CAAAGT 9938 | ||||| ||| ||||| | ||| || || ||||||||||| || |||| | || | Sbjct 194975 TTCCTGGAGGACCGGCGAGAATGGCGCCGCGAGGAATCTTGGCACCCAGCTTCTCGAACT 194916 Query 9939 ATCTCTCAGGTTGCTTAAGAAA 9960 ||||||||||||| || || Sbjct 194915 ---TCTCAGGTTGCTTCAGGAA 194897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583259582443080