Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq140 86.0 4e-12 >seq140 Length=1272624 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| | ||| || ||||| || || |||||||| || || || |||| Sbjct 762693 GACAAGGAGGGTATCCCGCCTGACCAGCAGCGCTTGATTTTTGCTGGTAAGCAGCTGGAA 762634 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| || | | || ||| ||||||||||| || ||||||||| |||| ||||| | Sbjct 762633 GACGGTCGTACCCTGAGCGACTACAACATCCAGAAGGAGAGCACTCTGCACCTGGTTCTC 762574 Query 28003 CGTTTGCGTGGCGGC 28017 ||| | ||||| ||| Sbjct 762573 CGTCTCCGTGGTGGC 762559 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355861675708809