Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq138 123 3e-23 >seq138 Length=1076999 Score = 123 bits (136), Expect = 3e-23 Identities = 277/411 (67%), Gaps = 4/411 (1%) Strand=Plus/Minus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGT-CACCATCTTCCTTAACTCGTTTCAT 78013 ||||||||||| || |||||||| | | ||||| || |||| || || || ||||| Sbjct 836727 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTT-CTCGACACGCTTCAT 836669 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 |||||||| || ||||| ||||||| || | || |||| | | || || || || Sbjct 836668 GAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCC 836609 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 ||||| ||||| || || || | | || | ||||| || || || || || Sbjct 836608 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 836549 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | | ||||| || || || || ||||| || | |||| ||| ||||| || | Sbjct 836548 GGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAA 836489 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 |||| || ||| || ||||| ||||| || || || || || || | || || || Sbjct 836488 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCC 836429 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 | | || || || | | | || || || || |||||||| || || | || Sbjct 836428 AGTGGCACGGATGCGGTGGACGTTCAAACCGATACCACCAGCCATCTTGGAGATCATGGC 836369 Query 78314 GCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | |||| |||| || || ||||||||||| || ||||||||| |||||| Sbjct 836368 AC-ACGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGT 836319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694667349878880