Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20reesei_20[genbank_20GCA_5F001999515.1_202017-02-13] 167 sequences; 32,472,817 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq138 123 4e-23 >seq138 Length=1076999 Score = 123 bits (136), Expect = 4e-23 Identities = 277/411 (67%), Gaps = 4/411 (1%) Strand=Plus/Minus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCAT 76608 ||||| ||||| || || ||||| | | ||| || | ||||| | || || ||||| Sbjct 836727 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTTC-TCGACACGCTTCAT 836669 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 |||||||| || ||||| ||||||| || | || |||| | | || || || || Sbjct 836668 GAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGCGCGAACCTCCTCCTTGCC 836609 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| ||||| ||||| || | | || | ||||| || || || || || Sbjct 836608 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 836549 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || || || ||||| || | |||| ||||||||| || | Sbjct 836548 GGCGAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGTATCGGGCAGTGTTGTTGAA 836489 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||| || ||| || ||||||||||| || || || || || || | || || || Sbjct 836488 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCGATGTAGGAGCC 836429 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 | ||||| || | | || || || || ||||| || ||||| | || Sbjct 836428 AGTGGCACGGATGCGGTGGACGTTCAAACCGATACCACCAGCCATCTTGGAGATCATGGC 836369 Query 76909 ACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGT 76958 ||| ||| |||| ||||||||||| ||||| || || |||||| |||||| Sbjct 836368 ACA-CGTCTTCAGAGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGT 836319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712932911749440