Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq97 96.9 3e-15 >seq97 Length=261666 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 119642 CTTGTACTCGCCCACACGTTTTTCaaaaaaaTTAGTCTTGCCCTCAAGAGATATGTTATT 119701 || ||| ||| | ||||| || ||||| || || |||||||| ||||||| ||||| | Sbjct 4050 CTGGTAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGAGAAATGTTCTC 3991 Query 119702 CATAAACTCGAAAGGATTTGCAGTGTTGAAATGCTTGTCGTAGCCCAACTCGAACAA-CA 119760 |||||| || || || || | || ||| | ||| |||| ||| | | ||||| || Sbjct 3990 CATAAAGTCAAAGGGGTTGGAAGACTTGTAGATCTTCTCGTTGCCGAGAGC-AACAAGCA 3932 Query 119761 GTCGATCTGCCACAAACTCGATGTATTCGCACATGGATTGCGAATTCATGCCCAACATAG 119820 | || || || |||||||||||||| | ||| | | || |||||||||| || | Sbjct 3931 GGCGGTCAGCAACAAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCCAGCAGGG 3872 Query 119821 CGACCGGTAAAGCATTGGTAAAGAAATCCTTTTCAAT 119857 || || | ||| | ||| ||||| || | ||||| Sbjct 3871 CGCAGGGGAGAGCCTCGGTCAAGAACTCTTGCTCAAT 3835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478661759789040