Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq97 82.4 7e-11 >seq97 Length=261666 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104592 GTATTCGCCTACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCAT 104651 ||| ||| | || || || ||||| || || |||||||| | |||||||| || | ||| Sbjct 4047 GTAGTCGGCAACACGCTTCTCAAAGAAGTTGGTCTTGCCACCAAGAGAAATGTTCTCCAT 3988 Query 104652 AAATTCGAAAGGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCG 104711 ||| || || || || ||| ||| | || |||| ||| || | | | ||| || Sbjct 3987 AAAGTCAAAGGGGTTGGAAGACTTGTAGATCTTCTCGTTGCCGAGAGCAACAAGCAGGCG 3928 Query 104712 ATCCGCCACAAATTCGATGTACTCGCACATAGAATGTGCATTCATGCCCAGCATTGCGAC 104771 || || ||||| |||||||||| ||| | | | ||||||||||||| ||| Sbjct 3927 GTCAGCAACAAACTCGATGTACTGCTTCATCAAGTTGGAGTTCATGCCCAGCAGGGCGCA 3868 Query 104772 GGGTAAAGCGTTAGTaaaaaaaTCTTTCTCGAT 104804 ||| | ||| | || || || |||| ||| || Sbjct 3867 GGGGAGAGCCTCGGTCAAGAACTCTTGCTCAAT 3835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935439336585