Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq97 93.3 9e-14 >seq97 Length=261666 Score = 93.3 bits (102), Expect = 9e-14 Identities = 155/224 (69%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || || || || | || ||| | ||| ||| | || ||| Sbjct 3814 ATCATCACCGATGCTGTCCGAATTGAGCAAGAGTTCTTGACCGAGGCTCTCCCCTGCGCC 3873 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 || | ||||||||||| | | ||| ||||||||||| || || || |||||| | Sbjct 3874 CTGCTGGGCATGAACTCCAACTTGATGAAGCAGTACATCGAGTTTGTTGCTGACCGCCTG 3933 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 | | || || || | ||||| | ||||| || |||||||||| |||||||||| Sbjct 3934 CTTGTTGCTCTCGGCAACGAGAAGATCTACAAGTCTTCCAACCCCTTTGACTTTATGGAG 3993 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 |||||| ||| || || || |||||||| || |||||||| Sbjct 3994 AACATTTCTCTTGGTGGCAAGACCAACTTCTTTGAGAAGCGTGT 4037 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878488020450