Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24]
107 sequences; 45,820,083 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq93 214 2e-50
seq97 127 3e-24
>seq93
Length=305044
Score = 214 bits (236), Expect = 2e-50
Identities = 950/1488 (64%), Gaps = 31/1488 (2%)
Strand=Plus/Plus
Query 115864 TTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGC 115923
|||||||| ||||| || || ||| || | | | |||||||||| ||||| |||
Sbjct 224209 TTGACAACCTGGAACTCGCCGGCAAGGACACGGCGCTGGTAGATGTTGGAGGTGTAGGGC 224268
Query 115924 TCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATG 115983
|| |||||||||||||| |||| ||| |||| ||| ||| || ||||| || || | |
Sbjct 224269 TCGAAGCACTCATTGTTGCCCAGGATCTGGGAAGTGCTGGCAGTTGGCATAGGGGCAACG 224328
Query 115984 AGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC---G 116040
|| | ||||||||| | ||| | || | || | |||||||| | |||||| ||
Sbjct 224329 AGCAAGCTGTTGCGCACACCGTGCTCCTTGATCTGCTCCTTGAGAGAGTCCCACTCCCAC 224388
Query 116041 TAGT-TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGG 116099
||| ||| | || | |||||||| || || || ||||| || | || || ||
Sbjct 224389 AAGTCGGAG----GGCTTGACATCCCACATGTCGAATTGAAGGATGCCCTCAGATGCAGG 224444
Query 116100 CGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAG 116159
||||||| |||| | || |||||||| |||| || | || ||||| ||
Sbjct 224445 TGATCCCTTGAATGATTGGTAGGGGCCCTCGACCTTGGCAATCTCCATAGAAGCCTCAAG 224504
Query 116160 GGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATC 116219
||| ||||| || ||||||||||| || | |||| | ||||| || ||
Sbjct 224505 GGCAGCGTGGTAGATTGTCTCAAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTC 224564
Query 116220 AAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGG 116279
||| | | || || || |||| || ||||| |||||||| | || || ||
Sbjct 224565 AAAAGGCATGCGCAGGGCAAGGAAAGCATCAGCAAGACCCTGGACACCAACACCGATAGG 224624
Query 116280 GCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAAC 116339
| || | ||| || || || || || || || || ||| ||| ||||
Sbjct 224625 TCTGTGACGCATGTTGCTGTTACGGGCCTCCTGGACAGGGTAGTGGTTCACATCAATAAT 224684
Query 116340 CCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACT 116399
| | || || || | || ||||| |||| ||| |||||||| | | ||| | |
Sbjct 224685 CTTGTTCAGGTTACGGACAACCACCTTGGTGACTTCGTGAAGCTTCTTAAAGTCATAGCA 224744
Query 116400 GCGAGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGT 116459
| | | | |||||| ||| ||||| | || |||| || || ||||
Sbjct 224745 CCCTTCGTTGTAGTCGACATAGGCAGGGAGGGCCAAAGAGGCCAAGTTGCAGACAGCAAC 224804
Query 116460 CTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 116519
|||||| || |||||| ||||| || || || | || || || ||||| ||
Sbjct 224805 CTCATCAGGGGCACAGTACTCAATAATCTCAGTGCAGAGGTTAGAGCTGCGGATGGTACC 224864
Query 116520 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTCCC 116579
|| |||||| || || ||| ||| || |||||||||||||| | || | ||
Sbjct 224865 CAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATGAAGGGGTTGCC 224924
Query 116580 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGCGT 116638
||||| || |||| | || || | | ||| | | || | || | | ||| |
Sbjct 224925 AGTCTCGGTCTGGGCTTCCAGGATGGAATACCACAGCTTCTG-AGCGCGGATAGTCTTGC 224983
Query 116639 TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTCACCCACAGC-C 116697
| || ||||||| ||||||||| || | ||||| ||||| || ||| |||
Sbjct 224984 GACCACGTCCCTCCTTCTCGTACTTCTCATACAAAGCCTCGAACTCCTC-GCCATAGCAG 225042
Query 116698 TCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA--CCCTCCTCAA 116755
|| | || || || || | || || | ||| | ||| | ||| || |||||
Sbjct 225043 TCAGCAAGGCCAGGGCACTCGTTGGGGCACATGAGCGTCCA--GTCCAAGTTCTTCTCAA 225100
Query 116756 CCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTT 116815
| |||||||||||||| || || |||||||| || ||| | || ||| || | |
Sbjct 225101 CACGCTTCATGAAGAGATCGGGAATCCAGAGAGCAAGGAATAAGTCGCGAGCACGGACCT 225160
Query 116816 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTT 116875
| || | || || || || | || | || || | || ||| |||||||| || |
Sbjct 225161 CCTCCTTACCGTGGTTCTTGCGGAGATCAAGGAACTCAAAGACATCAGCGTGCCATGGCT 225220
Query 116876 CCAGGTACACCGCGATTG-AC-----CCCTTGCGACGACCAGCCTGGTTTACATACCTCG 116929
||||||| | || | | || | |||| ||| |||||| || || || |
Sbjct 225221 CCAGGTAGATGGCAAAGGCACCAGGACGCTTG---TTGCCACCCTGGTCGACGTATCTGG 225277
Query 116930 CCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCC 116989
| || ||| || || |||||||| ||||||||||| | || || || || |||
Sbjct 225278 CAGTGTTGTTGAAGACTCGAAGCATGGGAATGATACCGTTGGAAGTACCGTTGGTGCCCG 225337
Query 116990 GAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 117049
||| ||| | |||| | || ||||| || || || || || || ||| ||
Sbjct 225338 CAATGTAAGAACCGGTGGCACGGATGCGGTGGACGTTCAAGCCGATGCCGCCAGCCATCT 225397
Query 117050 TTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 117109
| || || || ||| | | ||| || | ||||| || || || || ||||
Sbjct 225398 TGGAAATCATGGCACACGTCTTCAGAGTGTCATAGATACCCTCAATGCTATCGTCCTTCA 225457
Query 117110 TTGCGATGAGGAAGCAGCTCGACATTTGTGGCCT-TGGTGTACCAGCGTTGAAGAGGGTT 117168
| | | | |||||| |||| || ||||| || ||||||||||||||||||||
Sbjct 225458 TGTCAACCAAGAAGCATGAAGACAGCTG-GGCCTGCGGGGTACCAGCGTTGAAGAGGGTG 225516
Query 117169 GGTGTCGCGTGGATGAACATACCTTG--GGACATCTTATCGTAGGTCTCCAAGACAGAGG 117226
|| | |||||| ||| | | |||| ||||| | ||| ||||||| ||||
Sbjct 225517 GGGGAGGCGTGGGTGA--AGAACTTGCTCGACATGAGGTGGTATGTCTCCAGGACACGCT 225574
Query 117227 GAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGGTGTTTCCA 117286
|||||| || || || || | | || ||||||| ||||| || ||| || |
Sbjct 225575 CAATGTCGTCTCCCCAGATGCCAACAGCCACTCGCATAATCATGTGCTGTGGTCGCTCAA 225634
Query 117287 TCAGGATACCATCGAGCCTCTGGAGGTAACTCTTCTCCAAGGTCTTGA 117334
| | ||||| ||| || ||||||| | |||||| |||||||
Sbjct 225635 CAATCTTGCCATCAAGCTTCAGGAGGTATGACCGCTCCAAAGTCTTGA 225682
>seq97
Length=261666
Score = 127 bits (140), Expect = 3e-24
Identities = 344/521 (66%), Gaps = 9/521 (2%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| |||||||||||||| |||||||| || || || ||| ||| ||
Sbjct 3758 GCAAAGTCGGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCG 3699
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
||||||||||| |||||||| | |||||| || | ||| | ||| |||||||||
Sbjct 3698 GGCATGAGACCTCGCTTCTTGAGCCAGAAGATGGATGCAAAGGCGCCGCTGAAGAAGATA 3639
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699
||||| || || || |||| || |||| |||||||| | ||| | | |
Sbjct 3638 CCCTCGACGGCAGCAAAGGCAACCAGGCGCTGAGCAAAGGAAGAGTTCTTGTCCTGGATC 3579
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
||||| || ||||| | ||||| || || || |||| |||| || || | |||
Sbjct 3578 CACTTGATGGCCCAGTCAGCCTTCTTGCGAATGCAAGGGATAGTCTCAATGGCGTTGAAG 3519
Query 127760 AGTTCCTT--CTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTT 127817
|| | || | ||| | || |||||||| | || ||||| || || || |
Sbjct 3518 AGATAGTTGCGCTGGCTGTT--CTCCTTGATGTAGGTGTCGATGAGCAGGGAGTAGGTCT 3461
Query 127818 CGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATC 127876
|| ||||| | | ||| || | ||| | ||||||| | || || ||| |||
Sbjct 3460 CGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCATCGAGCCTCGGGGATC 3402
Query 127877 TGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCA 127936
|| ||||| || || | | ||||| ||||| ||||| || | |||
Sbjct 3401 TGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCATCAGAGGCGGCA 3342
Query 127937 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 127993
|| || |||||||| | ||||| | || || | ||||||| || | ||||||
Sbjct 3341 AAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAG 3282
Query 127994 TCGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
|||| |||||||| || || || | ||| || || |||||
Sbjct 3281 TCGTGCAGATCCTTGGACAGGTCAATCTCTTCGGCGGTCCA 3241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613506379434120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |