Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20virens_20[genbank_20GCA_5F001835465.1_202016-10-24] 107 sequences; 45,820,083 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq97 113 4e-20 >seq97 Length=261666 Score = 113 bits (124), Expect = 4e-20 Identities = 215/317 (68%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | ||||| ||| |||||| ||||| || Sbjct 79929 TCGGTCTCGGGGTTCTTGCACTTCTTGCAGAGAACAAATTTGTTGATGAAGCCATCGAGG 79988 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 | ||||| | ||| ||| ||||||| |||||| | ||| | || |||| ||| Sbjct 79989 TGATCCTGCAGCTTTGCGGCATCGTGGGCGCCGTTAATGATCCAACGGTCGTCCTTGGGG 80048 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 |||| | || || || ||||||||| | || |||||||| | ||| | || Sbjct 80049 TCGATGTTGGTCTGAGCTCCCAGCTCGAAACCAAAGTACTTGATGACATAAGAACCAGGG 80108 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| | | ||||| | || |||||||| || |||||||| ||||| ||| Sbjct 80109 CGGGCAAGAGATTGGGCGACGCTAGACAAGTTGACGACAACGGTCTTGATACCGTTACCC 80168 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||| | ||||| || ||| ||| |||||||||||||| || || ||| Sbjct 80169 TTGCCTTCAATCTTGGTCTGGAGGCGTTCCATCTTGTAGCGGTAGAAGGCATCGCTGACA 80228 Query 34618 TTGCGGTTAACGTTCAC 34634 | ||| |||||| || Sbjct 80229 TCGCGACGAACGTTGAC 80245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841061628751